G576932


Basic Information

Item Value
gene id G576932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13734870 ~ 13735111 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658019
CCCTCTACAATTTGATTGTTTTGGAACCACAGAACTTTTCCAAAGCTTGGACTGAAAAACAGAAAGGTTACGGTTTTCTCAGGAGTTGTCAAGATTCTAGTCATCTTGAGCAAGACTCCCTGGAGATCTGGTGATTTACAGTAAGTTCTAAATGGCtcggacagagagaaaagagagagcggaGACAACAGAGGAACACAGGTACCTTGGAAGCAGTCTGTGGTGAAAATCCTTTTCTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658019 True 242 lncRNA 0.43 1 13734870 13735111

Neighbor

gene id symbol gene type direction distance location
cdadc1 LOC106575509 coding upstream 140112 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 151217 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 161169 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 168373 13553095 ~ 13566497 (+)
LOC110527094 NA coding upstream 207432 13524500 ~ 13527438 (+)
tsga10 LOC106574631 coding downstream 396330 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 411100 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 426788 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 483242 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 516175 14251286 ~ 14259513 (+)
G576930 NA non-coding upstream 1168 13733502 ~ 13733702 (+)
G576791 NA non-coding upstream 48399 13684493 ~ 13686471 (+)
G576770 NA non-coding upstream 101384 13632868 ~ 13633486 (+)
G576767 NA non-coding upstream 103367 13631077 ~ 13631503 (+)
G576756 LOC106575511 non-coding upstream 113566 13617588 ~ 13621304 (+)
G576933 NA non-coding downstream 195 13735306 ~ 13735634 (+)
G576944 NA non-coding downstream 16206 13751317 ~ 13751539 (+)
G576949 NA non-coding downstream 36635 13771746 ~ 13774732 (+)
G576917 NA non-coding downstream 71520 13806631 ~ 13810439 (+)
G576956 NA non-coding downstream 76063 13811174 ~ 13811393 (+)
G576241 LOC106575516 other upstream 245133 13486516 ~ 13489737 (+)
G576161 NA other upstream 527381 13173312 ~ 13207489 (+)
G576160 NA other upstream 561796 13172784 ~ 13173074 (+)
G575758 NA other upstream 1192389 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1266119 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 380225 14115016 ~ 14116345 (+)
G577261 NA other downstream 437412 14172523 ~ 14180064 (+)
G577561 NA other downstream 670985 14406096 ~ 14406598 (+)

Expression


Co-expression Network