G576933


Basic Information

Item Value
gene id G576933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13735306 ~ 13735634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658020
caaagagctgctggcaacgcacaaaagtgctgtttgaattaatgtttacgcgcctgcttctgcctaccacccctcagtcagatacttgtatgcttgtatgctcagctagataatatgcaacgcaggacacgctagataatatctagtaatatcatcaaccatgtgtagttaactagtgattatgattgattgttttttataagataagtttaatgccagctagcaacttaccttggcttactgcatttgcgtaacaggcagtctccttgtggagtgcaatgagagagaggcaggttgttattgcgttggactagttaactgtaaggttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658020 True 329 lncRNA 0.41 1 13735306 13735634

Neighbor

gene id symbol gene type direction distance location
cdadc1 LOC106575509 coding upstream 140548 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 151653 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 161605 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 168809 13553095 ~ 13566497 (+)
LOC110527094 NA coding upstream 207868 13524500 ~ 13527438 (+)
tsga10 LOC106574631 coding downstream 395807 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 410577 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 426265 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 482719 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 515652 14251286 ~ 14259513 (+)
G576932 NA non-coding upstream 195 13734870 ~ 13735111 (+)
G576930 NA non-coding upstream 1604 13733502 ~ 13733702 (+)
G576791 NA non-coding upstream 48835 13684493 ~ 13686471 (+)
G576770 NA non-coding upstream 101820 13632868 ~ 13633486 (+)
G576767 NA non-coding upstream 103803 13631077 ~ 13631503 (+)
G576944 NA non-coding downstream 15683 13751317 ~ 13751539 (+)
G576949 NA non-coding downstream 36112 13771746 ~ 13774732 (+)
G576917 NA non-coding downstream 70997 13806631 ~ 13810439 (+)
G576956 NA non-coding downstream 75540 13811174 ~ 13811393 (+)
G576960 NA non-coding downstream 84625 13820259 ~ 13824499 (+)
G576241 LOC106575516 other upstream 245569 13486516 ~ 13489737 (+)
G576161 NA other upstream 527817 13173312 ~ 13207489 (+)
G576160 NA other upstream 562232 13172784 ~ 13173074 (+)
G575758 NA other upstream 1192825 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1266555 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 379702 14115016 ~ 14116345 (+)
G577261 NA other downstream 436889 14172523 ~ 14180064 (+)
G577561 NA other downstream 670462 14406096 ~ 14406598 (+)

Expression


Co-expression Network