G576944


Basic Information

Item Value
gene id G576944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13751317 ~ 13751539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658032
gctaggtTGACTATCTTAGGCCAGGTGGAACTGTCTCTTAGGCTAGGTGGAAATGTATCTTAGGCTAGGTGGaactgtatcttaggctaggtggaactgtatcttaggctaggtcggactgtatcttaggctaggtggaactgtatcttaggctaggtggaactgtatcttaggctaggtgGAACTGTATATTGGGCTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658032 True 201 lncRNA 0.47 2 13751317 13751539

Neighbor

gene id symbol gene type direction distance location
cdadc1 LOC106575509 coding upstream 156559 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 167664 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 177616 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 184820 13553095 ~ 13566497 (+)
LOC110527094 NA coding upstream 223879 13524500 ~ 13527438 (+)
tsga10 LOC106574631 coding downstream 379902 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 394672 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 410360 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 466814 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 499747 14251286 ~ 14259513 (+)
G576933 NA non-coding upstream 15683 13735306 ~ 13735634 (+)
G576932 NA non-coding upstream 16206 13734870 ~ 13735111 (+)
G576930 NA non-coding upstream 17615 13733502 ~ 13733702 (+)
G576791 NA non-coding upstream 64846 13684493 ~ 13686471 (+)
G576770 NA non-coding upstream 117831 13632868 ~ 13633486 (+)
G576949 NA non-coding downstream 20207 13771746 ~ 13774732 (+)
G576917 NA non-coding downstream 55092 13806631 ~ 13810439 (+)
G576956 NA non-coding downstream 59635 13811174 ~ 13811393 (+)
G576960 NA non-coding downstream 68720 13820259 ~ 13824499 (+)
G576962 NA non-coding downstream 79940 13831479 ~ 13831827 (+)
G576241 LOC106575516 other upstream 261580 13486516 ~ 13489737 (+)
G576161 NA other upstream 543828 13173312 ~ 13207489 (+)
G576160 NA other upstream 578243 13172784 ~ 13173074 (+)
G575758 NA other upstream 1208836 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1282566 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 363797 14115016 ~ 14116345 (+)
G577261 NA other downstream 420984 14172523 ~ 14180064 (+)
G577561 NA other downstream 654557 14406096 ~ 14406598 (+)

Expression


Co-expression Network