G577123


Basic Information

Item Value
gene id G577123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13945918 ~ 13946252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658244
ctgtacctgcagcctgcctctctctcagccaaCTGTACCTGcaacctgcccctctctctctcatttaactGCAGCTGCATCctgcctctctcagtcaactgtagctgcagactgcctctctctctcagtcaagtgtagctgcaacctgcttctctctcagtcaactgtagctccaacctgcgtctctctctctcaactgtagctgcaacctgcctctctctctcagtcaactgtagctgtgacctgcctctctctctcagtcaactgtagctgcaacctgcctctctctctcagtcaactgtagcagcaaactgcctctctctcagtcaactgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658244 True 335 lncRNA 0.53 1 13945918 13946252

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 139875 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 351160 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 362265 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 372217 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 379421 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 185189 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 199959 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 215647 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 272101 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 305034 14251286 ~ 14259513 (+)
G577120 NA non-coding upstream 21223 13924279 ~ 13924695 (+)
G577119 NA non-coding upstream 22666 13922835 ~ 13923252 (+)
G577118 NA non-coding upstream 31257 13914446 ~ 13914661 (+)
G576999 NA non-coding upstream 36448 13908796 ~ 13909470 (+)
G576998 NA non-coding upstream 40107 13901452 ~ 13905811 (+)
G577164 NA non-coding downstream 66416 14012668 ~ 14012880 (+)
G577203 NA non-coding downstream 105472 14051724 ~ 14052082 (+)
G577205 NA non-coding downstream 110954 14057206 ~ 14057770 (+)
G577216 NA non-coding downstream 127875 14074127 ~ 14074335 (+)
G577233 NA non-coding downstream 154351 14100603 ~ 14100815 (+)
G576241 LOC106575516 other upstream 456181 13486516 ~ 13489737 (+)
G576161 NA other upstream 738429 13173312 ~ 13207489 (+)
G576160 NA other upstream 772844 13172784 ~ 13173074 (+)
G575758 NA other upstream 1403437 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1477167 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 169084 14115016 ~ 14116345 (+)
G577261 NA other downstream 226271 14172523 ~ 14180064 (+)
G577561 NA other downstream 459844 14406096 ~ 14406598 (+)

Expression


Co-expression Network