G577205


Basic Information

Item Value
gene id G577205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14057206 ~ 14057770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658340
cacTCCATCTCTTCTTTTCACAGCTGATACAGTAGAAGAGGAaaacacgctctctctctctctctctctgtctctctctctctctctgtctctctctctgtctctctctctctgtctctctctctctctgtctctctctgtctctctctctctctgtctctctctctctctctctctctgtctctctctgtctctctctctctctgtctctctctctctcgctccctctctctctgtctctctctctctctccctctctctgtctctgtctctctctctctctctctgtctctctctctctctctctctctctctgtctctctctctctctctgtctgtctctctctctctctctgtctctgtctctctctctctctctgtctgtctctctctctctctctctccaggtgttcATACAGTAGACGAAGTAAtcaaacagagagatggagagagctcaAGTCGGCTCTGAacaaacagagagatggagagagctccAGTCGGTTCTGAacaaacagagagatggagagagctccAGTCGGTTCTGAacaaacagagagatggagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658340 True 565 lncRNA 0.49 1 14057206 14057770

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 251163 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 462448 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 473553 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 483505 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 490709 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 73671 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 88441 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 104129 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 160583 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 193516 14251286 ~ 14259513 (+)
G577203 NA non-coding upstream 5124 14051724 ~ 14052082 (+)
G577164 NA non-coding upstream 44326 14012668 ~ 14012880 (+)
G577123 NA non-coding upstream 110954 13945918 ~ 13946252 (+)
G577120 NA non-coding upstream 132511 13924279 ~ 13924695 (+)
G577119 NA non-coding upstream 133954 13922835 ~ 13923252 (+)
G577216 NA non-coding downstream 16357 14074127 ~ 14074335 (+)
G577233 NA non-coding downstream 42833 14100603 ~ 14100815 (+)
G577234 NA non-coding downstream 43395 14101165 ~ 14101391 (+)
G577236 NA non-coding downstream 46341 14104111 ~ 14104424 (+)
G577235 NA non-coding downstream 48658 14106428 ~ 14106665 (+)
G576241 LOC106575516 other upstream 567469 13486516 ~ 13489737 (+)
G576161 NA other upstream 849717 13173312 ~ 13207489 (+)
G576160 NA other upstream 884132 13172784 ~ 13173074 (+)
G575758 NA other upstream 1514725 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1588455 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 57566 14115016 ~ 14116345 (+)
G577261 NA other downstream 114753 14172523 ~ 14180064 (+)
G577561 NA other downstream 348326 14406096 ~ 14406598 (+)

Expression


Co-expression Network