G577408


Basic Information

Item Value
gene id G577408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14239156 ~ 14239433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658582
tcttacatctctctgagttctagttctactgtattatatcTCCCTGAGTTCaggttctagtatattatgtctctctgcgTTCTAGTTCTGGTATCTtttgtctctctgagttctagttctagtatctgatgtctctctgagttctagttctagtatcttatgtctctccaagttctagttctagtatattatgtctctctgcgttctagttctagtatcttatgtctctctgcgttctagttctagtatcttatgtctctctgagttctagttctagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658582 True 278 lncRNA 0.37 1 14239156 14239433

Neighbor

gene id symbol gene type direction distance location
LOC118965342 NA coding upstream 8173 14218353 ~ 14230983 (+)
LOC110527360 LOC106574621 coding upstream 72634 14161899 ~ 14166522 (+)
LOC110527359 LOC106574634 coding upstream 79571 14146070 ~ 14159585 (+)
tsga10 LOC106574631 coding upstream 95614 14131441 ~ 14143542 (+)
LOC110527351 LOC106575518 coding upstream 433113 13714651 ~ 13806043 (+)
LOC110527363 tm182 coding downstream 11853 14251286 ~ 14259513 (+)
LOC110527366 LOC105019822 coding downstream 590543 14829976 ~ 14833322 (+)
LOC110527365 NA coding downstream 638290 14877723 ~ 14902881 (+)
LOC110527369 LOC106575456 coding downstream 664220 14903653 ~ 14912668 (+)
wbp4 LOC106592210 coding downstream 675275 14914708 ~ 14921041 (+)
G577259 NA non-coding upstream 69509 14168370 ~ 14169647 (+)
G577180 LOC106574637 non-coding upstream 123539 14115016 ~ 14116345 (+)
G577235 NA non-coding upstream 132491 14106428 ~ 14106665 (+)
G577236 NA non-coding upstream 134732 14104111 ~ 14104424 (+)
G577234 NA non-coding upstream 137765 14101165 ~ 14101391 (+)
G577409 NA non-coding downstream 4479 14243912 ~ 14244141 (+)
G577411 NA non-coding downstream 5749 14245182 ~ 14247502 (+)
G577421 NA non-coding downstream 30927 14270360 ~ 14286064 (+)
G577496 NA non-coding downstream 94194 14333627 ~ 14333857 (+)
G577499 NA non-coding downstream 96550 14335983 ~ 14336189 (+)
G577261 NA other upstream 59092 14172523 ~ 14180064 (+)
G576241 LOC106575516 other upstream 749419 13486516 ~ 13489737 (+)
G577561 NA other downstream 166663 14406096 ~ 14406598 (+)
G577876 LOC106575485 other downstream 721772 14961205 ~ 14971607 (+)
G577909 NA other downstream 733192 14972625 ~ 15014535 (+)
G578031 NA other downstream 1015738 15255171 ~ 15256207 (+)
G578389 NA other downstream 1222812 15462245 ~ 15464365 (+)

Expression


Co-expression Network