G577421


Basic Information

Item Value
gene id G577421
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14270360 ~ 14286064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658596
acaaagtttgcttcttcagtgtctttagatatttttgtcagatgttactatggaatactgaattacaAGGATTTCATAAGTggcaaaggcttttattgacaattacatgaagttgatgcaaagagtcaatatttgcagtgttgacccttctttttcaagacctctgcaatccgccctggcatgctgtcaattaacttctggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU658596 True 202 lncRNA 0.37 2 14270360 14286064

Neighbor

gene id symbol gene type direction distance location
LOC110527363 tm182 coding upstream 10847 14251286 ~ 14259513 (+)
LOC118965342 NA coding upstream 39377 14218353 ~ 14230983 (+)
LOC110527360 LOC106574621 coding upstream 103838 14161899 ~ 14166522 (+)
LOC110527359 LOC106574634 coding upstream 110775 14146070 ~ 14159585 (+)
tsga10 LOC106574631 coding upstream 126818 14131441 ~ 14143542 (+)
LOC110527366 LOC105019822 coding downstream 543912 14829976 ~ 14833322 (+)
LOC110527365 NA coding downstream 591659 14877723 ~ 14902881 (+)
LOC110527369 LOC106575456 coding downstream 617589 14903653 ~ 14912668 (+)
wbp4 LOC106592210 coding downstream 628644 14914708 ~ 14921041 (+)
LOC100136320 LOC100136320 coding downstream 635745 14921809 ~ 14927040 (+)
G577411 NA non-coding upstream 22858 14245182 ~ 14247502 (+)
G577409 NA non-coding upstream 26219 14243912 ~ 14244141 (+)
G577408 NA non-coding upstream 30927 14239156 ~ 14239433 (+)
G577259 NA non-coding upstream 100713 14168370 ~ 14169647 (+)
G577180 LOC106574637 non-coding upstream 154743 14115016 ~ 14116345 (+)
G577496 NA non-coding downstream 47563 14333627 ~ 14333857 (+)
G577499 NA non-coding downstream 49919 14335983 ~ 14336189 (+)
G577535 NA non-coding downstream 97764 14383828 ~ 14384029 (+)
G577546 NA non-coding downstream 106536 14392600 ~ 14392859 (+)
G577547 NA non-coding downstream 107694 14393758 ~ 14393977 (+)
G577261 NA other upstream 90296 14172523 ~ 14180064 (+)
G576241 LOC106575516 other upstream 780623 13486516 ~ 13489737 (+)
G577561 NA other downstream 120032 14406096 ~ 14406598 (+)
G577876 LOC106575485 other downstream 675141 14961205 ~ 14971607 (+)
G577909 NA other downstream 686561 14972625 ~ 15014535 (+)
G578031 NA other downstream 969107 15255171 ~ 15256207 (+)
G578389 NA other downstream 1176181 15462245 ~ 15464365 (+)

Expression


Co-expression Network