G577546


Basic Information

Item Value
gene id G577546
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14392600 ~ 14392859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658750
GTTTGTACTTGGTTCTTTAGATGAGGATTGATTGGGTACAACCCCAGGATAAACACTTTGGGATGGAGAGGCAATTTTACTGATACTATTTAGGATATCATATGTGATACCTCCTTCTAAAAATCTTGAATTTTCTCACCGTCCCACAGACAATAGACAACTTTAGAGTGATTGCACTTGTAGCATATATCTGGAATTGTACTATTAAACTTATTTAACTTAGCAGGGGTTACATATGTTCGCATCAACCAATTGTATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658750 True 260 lncRNA 0.36 1 14392600 14392859

Neighbor

gene id symbol gene type direction distance location
LOC110527363 tm182 coding upstream 133087 14251286 ~ 14259513 (+)
LOC118965342 NA coding upstream 161617 14218353 ~ 14230983 (+)
LOC110527360 LOC106574621 coding upstream 226078 14161899 ~ 14166522 (+)
LOC110527359 LOC106574634 coding upstream 233015 14146070 ~ 14159585 (+)
tsga10 LOC106574631 coding upstream 249058 14131441 ~ 14143542 (+)
LOC110527366 LOC105019822 coding downstream 437117 14829976 ~ 14833322 (+)
LOC110527365 NA coding downstream 484864 14877723 ~ 14902881 (+)
LOC110527369 LOC106575456 coding downstream 510794 14903653 ~ 14912668 (+)
wbp4 LOC106592210 coding downstream 521849 14914708 ~ 14921041 (+)
LOC100136320 LOC100136320 coding downstream 528950 14921809 ~ 14927040 (+)
G577535 NA non-coding upstream 8571 14383828 ~ 14384029 (+)
G577499 NA non-coding upstream 56411 14335983 ~ 14336189 (+)
G577496 NA non-coding upstream 58743 14333627 ~ 14333857 (+)
G577421 NA non-coding upstream 106536 14270360 ~ 14286064 (+)
G577411 NA non-coding upstream 145098 14245182 ~ 14247502 (+)
G577547 NA non-coding downstream 899 14393758 ~ 14393977 (+)
G577554 NA non-coding downstream 4959 14397818 ~ 14398046 (+)
G577613 NA non-coding downstream 63875 14456734 ~ 14457565 (+)
G577618 NA non-coding downstream 78972 14471831 ~ 14472090 (+)
G577644 NA non-coding downstream 131291 14524150 ~ 14528460 (+)
G577261 NA other upstream 212536 14172523 ~ 14180064 (+)
G577180 LOC106574637 other upstream 276255 14115016 ~ 14116345 (+)
G576241 LOC106575516 other upstream 902863 13486516 ~ 13489737 (+)
G577561 NA other downstream 13237 14406096 ~ 14406598 (+)
G577876 LOC106575485 other downstream 568346 14961205 ~ 14971607 (+)
G577909 NA other downstream 579766 14972625 ~ 15014535 (+)
G578031 NA other downstream 862312 15255171 ~ 15256207 (+)
G578389 NA other downstream 1069386 15462245 ~ 15464365 (+)

Expression


Co-expression Network