G577613


Basic Information

Item Value
gene id G577613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14456734 ~ 14457565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658819
tcaaatgtattggtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgattctagttccgacaatgcagtaataaccaacgagtaatctaacctaacaattccaaaactactaccttatacacacaagtgtaaagggataaagaatatgtacatcaagatatatgaatgagtgatggtacataacggcataggcaagatgcagtagatggtattgagtacagtatatacatatgagatgagtaatgtagggtatgtaaacaaagtggtatagtttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtacagtatatacatatacaaatgagatgagtaatgtagggtatgtaaatattatattaagtagcattgtttaaagtggctagtgatatattttacatcaatttccatcaattcccattattaaagtggctggagttgagccagtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtcactcggtccctgctttgatgcacctgtactgacctcgccttctggatgataacggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctagagggcaggtagtttaaccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgtgggcggagcagttgccgtaccaggcggtgatacagcccgacaggatgctctcgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658819 True 832 lncRNA 0.42 1 14456734 14457565

Neighbor

gene id symbol gene type direction distance location
LOC110527363 tm182 coding upstream 197221 14251286 ~ 14259513 (+)
LOC118965342 NA coding upstream 225751 14218353 ~ 14230983 (+)
LOC110527360 LOC106574621 coding upstream 290212 14161899 ~ 14166522 (+)
LOC110527359 LOC106574634 coding upstream 297149 14146070 ~ 14159585 (+)
tsga10 LOC106574631 coding upstream 313192 14131441 ~ 14143542 (+)
LOC110527366 LOC105019822 coding downstream 372411 14829976 ~ 14833322 (+)
LOC110527365 NA coding downstream 420158 14877723 ~ 14902881 (+)
LOC110527369 LOC106575456 coding downstream 446088 14903653 ~ 14912668 (+)
wbp4 LOC106592210 coding downstream 457143 14914708 ~ 14921041 (+)
LOC100136320 LOC100136320 coding downstream 464244 14921809 ~ 14927040 (+)
G577554 NA non-coding upstream 58688 14397818 ~ 14398046 (+)
G577547 NA non-coding upstream 62757 14393758 ~ 14393977 (+)
G577546 NA non-coding upstream 63875 14392600 ~ 14392859 (+)
G577535 NA non-coding upstream 72705 14383828 ~ 14384029 (+)
G577499 NA non-coding upstream 120545 14335983 ~ 14336189 (+)
G577618 NA non-coding downstream 14266 14471831 ~ 14472090 (+)
G577644 NA non-coding downstream 66585 14524150 ~ 14528460 (+)
G577682 NA non-coding downstream 93375 14550940 ~ 14553344 (+)
G577710 NA non-coding downstream 184821 14642386 ~ 14642627 (+)
G577711 NA non-coding downstream 185203 14642768 ~ 14643294 (+)
G577561 NA other upstream 50136 14406096 ~ 14406598 (+)
G577261 NA other upstream 276670 14172523 ~ 14180064 (+)
G577180 LOC106574637 other upstream 340389 14115016 ~ 14116345 (+)
G577876 LOC106575485 other downstream 503640 14961205 ~ 14971607 (+)
G577909 NA other downstream 515060 14972625 ~ 15014535 (+)
G578031 NA other downstream 797606 15255171 ~ 15256207 (+)
G578389 NA other downstream 1004680 15462245 ~ 15464365 (+)
LOC110528902 atr other downstream 1035336 15492870 ~ 15498827 (+)

Expression


Co-expression Network