G577888


Basic Information

Item Value
gene id G577888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 14888390 ~ 14889828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU659132
CAGGGGTTCCTGACAtccccctaccctacccactgCCGAGGGGAACCAGGGGTTCCTGACTAACCCCTACCCACTGCTGAGGGGAACCAGTGGTACCtgactaccctctaccctacccactGTTGAATGGAACCAGGGGTTCCTGACTAACCCCTACCCTCTGCTGAGGGGAACCAGGGGTAACTGACTCCCCCTACCTTACCCACTGCTGAGGGGAACCAGAGGTACCTgactaccccctaccctacccattgCTGAGGGGAACCAGGGGTTCCTGACaaacccctaccctctgcTGAGGGGACCAGGGGTACCTGACACCCCCCTACCCTACCCACCCACTGCCGAGGGGAACCAGGGGTTCCTGACTAACCCCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU659132 True 379 lncRNA 0.61 2 14888390 14889828

Neighbor

gene id symbol gene type direction distance location
LOC110527366 LOC105019822 coding upstream 55068 14829976 ~ 14833322 (+)
LOC110527363 tm182 coding upstream 628877 14251286 ~ 14259513 (+)
LOC118965342 NA coding upstream 657407 14218353 ~ 14230983 (+)
LOC110527360 LOC106574621 coding upstream 721868 14161899 ~ 14166522 (+)
LOC110527359 LOC106574634 coding upstream 728805 14146070 ~ 14159585 (+)
LOC110527369 LOC106575456 coding downstream 13825 14903653 ~ 14912668 (+)
wbp4 LOC106592210 coding downstream 24880 14914708 ~ 14921041 (+)
LOC100136320 LOC100136320 coding downstream 31981 14921809 ~ 14927040 (+)
LOC110527376 LOC106575451 coding downstream 39373 14929201 ~ 14931750 (+)
LOC110519434 LOC106591654 coding downstream 102001 14991829 ~ 15002558 (+)
G577873 NA non-coding upstream 6083 14876748 ~ 14882307 (+)
G577870 NA non-coding upstream 18944 14869215 ~ 14869446 (+)
G577868 NA non-coding upstream 20669 14867499 ~ 14867721 (+)
G577836 NA non-coding upstream 85081 14803090 ~ 14803309 (+)
G577817 NA non-coding upstream 125835 14762331 ~ 14762555 (+)
G577909 NA non-coding downstream 82797 14972625 ~ 15014535 (+)
G577927 NA non-coding downstream 129729 15019557 ~ 15020204 (+)
G577932 NA non-coding downstream 134832 15024660 ~ 15024868 (+)
G577960 NA non-coding downstream 191020 15080848 ~ 15081268 (+)
G577967 NA non-coding downstream 203294 15093122 ~ 15093386 (+)
G577561 NA other upstream 481792 14406096 ~ 14406598 (+)
G577261 NA other upstream 708326 14172523 ~ 14180064 (+)
G577180 LOC106574637 other upstream 772045 14115016 ~ 14116345 (+)
G577876 LOC106575485 other downstream 71377 14961205 ~ 14971607 (+)
G578031 NA other downstream 365343 15255171 ~ 15256207 (+)
G578389 NA other downstream 572417 15462245 ~ 15464365 (+)
LOC110528902 atr other downstream 603073 15492870 ~ 15498827 (+)

Expression


Co-expression Network