Item | Value |
---|---|
gene id | G577909 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 14972625 ~ 15014535 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU659164 | False | 1752 | lncRNA | 0.38 | 3 | 14972625 | 14974604 |
TU659165 | False | 1866 | lncRNA | 0.38 | 2 | 14972625 | 14974604 |
TU659166 | False | 1866 | lncRNA | 0.38 | 3 | 14972625 | 14974604 |
TU659167 | False | 1809 | lncRNA | 0.38 | 3 | 14972625 | 14974604 |
TU659169 | False | 1809 | lncRNA | 0.38 | 3 | 14972625 | 14974604 |
TU659170 | False | 1901 | TUCP | 0.38 | 3 | 14972625 | 14974604 |
TU659171 | False | 1923 | TUCP | 0.38 | 2 | 14972625 | 14974604 |
TU659172 | False | 1866 | lncRNA | 0.38 | 2 | 14972625 | 14974604 |
TU659173 | False | 1866 | lncRNA | 0.38 | 3 | 14972625 | 14974604 |
TU659174 | False | 1923 | lncRNA | 0.38 | 2 | 14972625 | 14974604 |
TU659175 | False | 1846 | lncRNA | 0.38 | 4 | 14972625 | 14974604 |
TU659176 | True | 2131 | TUCP | 0.38 | 2 | 14972625 | 15014535 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110527376 | LOC106575451 | coding | upstream | 40875 | 14929201 ~ 14931750 (+) |
LOC100136320 | LOC100136320 | coding | upstream | 45585 | 14921809 ~ 14927040 (+) |
wbp4 | LOC106592210 | coding | upstream | 51584 | 14914708 ~ 14921041 (+) |
LOC110527369 | LOC106575456 | coding | upstream | 59957 | 14903653 ~ 14912668 (+) |
LOC110527365 | NA | coding | upstream | 69744 | 14877723 ~ 14902881 (+) |
LOC110519434 | LOC106591654 | coding | downstream | 17225 | 14991829 ~ 15002558 (+) |
LOC110527389 | LOC106575481 | coding | downstream | 112854 | 15087458 ~ 15091885 (+) |
trnar-ccu | NA | coding | downstream | 354040 | 15328644 ~ 15328716 (+) |
trnar-ccu-2 | NA | coding | downstream | 356490 | 15331094 ~ 15331164 (+) |
trnar-ccu-3 | NA | coding | downstream | 359191 | 15333795 ~ 15333865 (+) |
G577888 | NA | non-coding | upstream | 82797 | 14888390 ~ 14889828 (+) |
G577873 | NA | non-coding | upstream | 90318 | 14876748 ~ 14882307 (+) |
G577870 | NA | non-coding | upstream | 103179 | 14869215 ~ 14869446 (+) |
G577868 | NA | non-coding | upstream | 104904 | 14867499 ~ 14867721 (+) |
G577836 | NA | non-coding | upstream | 169316 | 14803090 ~ 14803309 (+) |
G577927 | NA | non-coding | downstream | 44953 | 15019557 ~ 15020204 (+) |
G577932 | NA | non-coding | downstream | 50056 | 15024660 ~ 15024868 (+) |
G577960 | NA | non-coding | downstream | 106244 | 15080848 ~ 15081268 (+) |
G577967 | NA | non-coding | downstream | 118518 | 15093122 ~ 15093386 (+) |
G577968 | LOC106591672 | non-coding | downstream | 119622 | 15094226 ~ 15100578 (+) |
G577876 | LOC106575485 | other | upstream | 1018 | 14961205 ~ 14971607 (+) |
G577561 | NA | other | upstream | 566027 | 14406096 ~ 14406598 (+) |
LOC118965342 | NA | other | upstream | 741693 | 14218353 ~ 14230983 (+) |
G577261 | NA | other | upstream | 792561 | 14172523 ~ 14180064 (+) |
LOC110527359 | LOC106574634 | other | upstream | 820001 | 14146070 ~ 14159585 (+) |
G578031 | NA | other | downstream | 280567 | 15255171 ~ 15256207 (+) |
G578389 | NA | other | downstream | 487641 | 15462245 ~ 15464365 (+) |
LOC110528902 | atr | other | downstream | 518297 | 15492870 ~ 15498827 (+) |
LOC110528906 | LOC106574480 | other | downstream | 1019054 | 15993464 ~ 16004993 (+) |
LOC110528915 | LOC106574584 | other | downstream | 1071679 | 16046065 ~ 16048048 (+) |
trnar-ccu-4 | NA | coding | downstream | 320626 | 15335161 ~ 15335233 (+) |