Item | Value |
---|---|
gene id | G578016 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 15198255 ~ 15228068 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
interaptin-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU659303 | False | 12371 | lncRNA | 0.46 | 8 | 15198255 | 15228068 |
TU659305 | True | 8239 | lncRNA | 0.46 | 4 | 15198255 | 15207360 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110527389 | LOC106575481 | coding | upstream | 106370 | 15087458 ~ 15091885 (+) |
LOC110519434 | LOC106591654 | coding | upstream | 195697 | 14991829 ~ 15002558 (+) |
LOC110527376 | LOC106575451 | coding | upstream | 266505 | 14929201 ~ 14931750 (+) |
LOC100136320 | LOC100136320 | coding | upstream | 271215 | 14921809 ~ 14927040 (+) |
wbp4 | LOC106592210 | coding | upstream | 277214 | 14914708 ~ 14921041 (+) |
trnar-ccu | NA | coding | downstream | 100576 | 15328644 ~ 15328716 (+) |
trnar-ccu-2 | NA | coding | downstream | 103026 | 15331094 ~ 15331164 (+) |
trnar-ccu-3 | NA | coding | downstream | 105727 | 15333795 ~ 15333865 (+) |
trnar-ccu-4 | NA | coding | downstream | 107093 | 15335161 ~ 15335233 (+) |
trnar-ccu-5 | NA | coding | downstream | 119575 | 15347643 ~ 15347715 (+) |
G578013 | LOC106575464 | non-coding | upstream | 235 | 15195668 ~ 15198020 (+) |
G578012 | NA | non-coding | upstream | 3819 | 15194126 ~ 15194436 (+) |
G578011 | NA | non-coding | upstream | 4516 | 15193201 ~ 15193739 (+) |
G578005 | NA | non-coding | upstream | 14007 | 15182161 ~ 15184248 (+) |
G577944 | NA | non-coding | upstream | 94968 | 15102750 ~ 15103287 (+) |
G578027 | NA | non-coding | downstream | 10055 | 15238123 ~ 15239924 (+) |
G578029 | NA | non-coding | downstream | 16023 | 15244091 ~ 15244636 (+) |
G578057 | NA | non-coding | downstream | 64500 | 15292568 ~ 15292954 (+) |
G578287 | NA | non-coding | downstream | 102701 | 15330769 ~ 15335156 (+) |
G578290 | NA | non-coding | downstream | 107914 | 15335982 ~ 15346591 (+) |
G577909 | NA | other | upstream | 183720 | 14972625 ~ 15014535 (+) |
G577876 | LOC106575485 | other | upstream | 226648 | 14961205 ~ 14971607 (+) |
G577561 | NA | other | upstream | 791657 | 14406096 ~ 14406598 (+) |
LOC118965342 | NA | other | upstream | 967323 | 14218353 ~ 14230983 (+) |
G577261 | NA | other | upstream | 1018191 | 14172523 ~ 14180064 (+) |
G578031 | NA | other | downstream | 27103 | 15255171 ~ 15256207 (+) |
G578389 | NA | other | downstream | 234177 | 15462245 ~ 15464365 (+) |
LOC110528902 | atr | other | downstream | 264833 | 15492870 ~ 15498827 (+) |
LOC110528906 | LOC106574480 | other | downstream | 765590 | 15993464 ~ 16004993 (+) |
LOC110528915 | LOC106574584 | other | downstream | 818215 | 16046065 ~ 16048048 (+) |