G578031


Basic Information

Item Value
gene id G578031
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 15255171 ~ 15256207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU659333
ctgtGGTTCAACTGGGCGGTGTGTTGGTGGGGTGCGGGCCGGCTGCATCCCTGCAGTGCTGAAGGACTCGGAGCGAGGAGGCAGGGAGGCCTCAGAGACCCGGCTGGAGACGGCCTTATGCTGCAGCGCTGGAGAACTCTGTCTGTTCAGCTTGGACCGCTCCTCCACCTGACACACATCATCATGATTATTAGACTACCTGGACATTACCAACAGGTTAATACGGTGTTGTCTACAGTGTTCTGAGGCAGGTTCATCATTGCATGTTGATCCGAGCAATCAATCATGCAATTAATGGTTAGAATCAACTGGTCCTCCTCTACAAGCTGtaactgagagatggagagagcgcggggatgatagagagagagcgagcggggataatagagagagagcgagcggggatgatagagagagagcgagcggggatgatagcgagagagcgagcggggatgatagagagagcgagcggggatgatagagagagcgagcggggatgatagagagagcgagcggggatgatagagagagagcgagcggggatgatagagagagagcgagcggggatgatagagagagagcgcggggatgatagagagagcgagcggggatgatagagagagcgagcggggatgatagagagagcgagcggggatgatagggagagagagcggggatgatagggagagagtgaggggatgatagggagagagtgaggggatgaTAGGGAGAGAGCGgagttggaggagaggaggagagggggatggaggagaggtggagagggggatggaggagaggaggaaaggtggatggaggagagggggatggaggagaggaggagaggaggaggaggagagggggatggaggagaggccgagttggaggagaagagggggatggaggagagggggatggaggagagggggatggaggagaggaggagagggggatggaggagaggaggagaggaggagagggggatggaggagaggaggagag

Function

NR:

description
TRAF2 and NCK-interacting protein kinase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU659333 True 999 TUCP 0.58 2 15255171 15256207

Neighbor

gene id symbol gene type direction distance location
LOC110527389 LOC106575481 coding upstream 163286 15087458 ~ 15091885 (+)
LOC110519434 LOC106591654 coding upstream 252613 14991829 ~ 15002558 (+)
LOC110527376 LOC106575451 coding upstream 323421 14929201 ~ 14931750 (+)
LOC100136320 LOC100136320 coding upstream 328131 14921809 ~ 14927040 (+)
wbp4 LOC106592210 coding upstream 334130 14914708 ~ 14921041 (+)
trnar-ccu NA coding downstream 72437 15328644 ~ 15328716 (+)
trnar-ccu-2 NA coding downstream 74887 15331094 ~ 15331164 (+)
trnar-ccu-3 NA coding downstream 77588 15333795 ~ 15333865 (+)
trnar-ccu-4 NA coding downstream 78954 15335161 ~ 15335233 (+)
trnar-ccu-5 NA coding downstream 91436 15347643 ~ 15347715 (+)
G578029 NA non-coding upstream 10535 15244091 ~ 15244636 (+)
G578027 NA non-coding upstream 15247 15238123 ~ 15239924 (+)
G578016 NA non-coding upstream 27103 15198255 ~ 15228068 (+)
G578018 NA non-coding upstream 39762 15210566 ~ 15215409 (+)
G578013 LOC106575464 non-coding upstream 57151 15195668 ~ 15198020 (+)
G578057 NA non-coding downstream 36361 15292568 ~ 15292954 (+)
G578287 NA non-coding downstream 74562 15330769 ~ 15335156 (+)
G578290 NA non-coding downstream 79775 15335982 ~ 15346591 (+)
G578297 NA non-coding downstream 96879 15353086 ~ 15354815 (+)
G578303 NA non-coding downstream 119496 15375703 ~ 15380028 (+)
G577909 NA other upstream 240636 14972625 ~ 15014535 (+)
G577876 LOC106575485 other upstream 283564 14961205 ~ 14971607 (+)
G577561 NA other upstream 848573 14406096 ~ 14406598 (+)
LOC118965342 NA other upstream 1024239 14218353 ~ 14230983 (+)
G577261 NA other upstream 1075107 14172523 ~ 14180064 (+)
G578389 NA other downstream 206038 15462245 ~ 15464365 (+)
LOC110528902 atr other downstream 236694 15492870 ~ 15498827 (+)
LOC110528906 LOC106574480 other downstream 737451 15993464 ~ 16004993 (+)
LOC110528915 LOC106574584 other downstream 790076 16046065 ~ 16048048 (+)
LOC110528786 omp-1 other downstream 1201838 16457220 ~ 16463699 (+)

Expression


Co-expression Network