Gene
RNA
| Item | Value |
|---|---|
| gene id | G578423 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 15567038 ~ 15568865 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU659837 | True | 312 | lncRNA | 0.52 | 4 | 15567038 | 15568865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528898 | LOC106574671 | coding | upstream | 51352 | 15513865 ~ 15515686 (+) |
| LOC110528777 | LOC106575448 | coding | upstream | 61845 | 15499437 ~ 15505193 (+) |
| LOC110528902 | atr | coding | upstream | 68211 | 15492870 ~ 15498827 (+) |
| LOC110528871 | LOC105019803 | coding | upstream | 77793 | 15478409 ~ 15489245 (+) |
| LOC110528896 | LOC106595470 | coding | upstream | 94156 | 15457306 ~ 15472882 (+) |
| ppp2r3a | ppp2r3a | coding | downstream | 37092 | 15605957 ~ 15647056 (+) |
| fndc3ba | LOC105019796 | coding | downstream | 80681 | 15649546 ~ 15814242 (+) |
| LOC110495697 | LOC106574566 | coding | downstream | 262945 | 15831810 ~ 15868293 (+) |
| LOC110495702 | LOC106574475 | coding | downstream | 304281 | 15873146 ~ 15883313 (+) |
| LOC110528900 | NA | coding | downstream | 340925 | 15903494 ~ 15927285 (+) |
| G578404 | NA | non-coding | upstream | 42223 | 15524265 ~ 15524815 (+) |
| G578398 | NA | non-coding | upstream | 58594 | 15508171 ~ 15508444 (+) |
| G578383 | NA | non-coding | upstream | 124461 | 15441415 ~ 15442577 (+) |
| G578344 | NA | non-coding | upstream | 148355 | 15417797 ~ 15418683 (+) |
| G578303 | NA | non-coding | upstream | 187010 | 15375703 ~ 15380028 (+) |
| G578356 | LOC106574468 | non-coding | downstream | 10071 | 15578936 ~ 15582633 (+) |
| G578427 | NA | non-coding | downstream | 22524 | 15591389 ~ 15591597 (+) |
| G578429 | NA | non-coding | downstream | 29209 | 15598074 ~ 15598341 (+) |
| G578430 | NA | non-coding | downstream | 30872 | 15599737 ~ 15599961 (+) |
| G578431 | NA | non-coding | downstream | 34768 | 15603633 ~ 15603910 (+) |
| G578389 | NA | other | upstream | 102673 | 15462245 ~ 15464365 (+) |
| G578031 | NA | other | upstream | 310831 | 15255171 ~ 15256207 (+) |
| G577909 | NA | other | upstream | 552503 | 14972625 ~ 15014535 (+) |
| G577876 | LOC106575485 | other | upstream | 595431 | 14961205 ~ 14971607 (+) |
| LOC110528906 | LOC106574480 | other | downstream | 424793 | 15993464 ~ 16004993 (+) |
| LOC110528915 | LOC106574584 | other | downstream | 477418 | 16046065 ~ 16048048 (+) |
| LOC110528786 | omp-1 | other | downstream | 889180 | 16457220 ~ 16463699 (+) |
| G579566 | NA | other | downstream | 1249677 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 1473544 | 17042409 ~ 17097924 (+) |
