Gene
RNA
| Item | Value |
|---|---|
| gene id | G578429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 15598074 ~ 15598341 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU659843 | True | 268 | lncRNA | 0.35 | 1 | 15598074 | 15598341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stag1a | LOC106575446 | coding | upstream | 22600 | 15530602 ~ 15575474 (+) |
| LOC110528898 | LOC106574671 | coding | upstream | 82388 | 15513865 ~ 15515686 (+) |
| LOC110528777 | LOC106575448 | coding | upstream | 92881 | 15499437 ~ 15505193 (+) |
| LOC110528902 | atr | coding | upstream | 99247 | 15492870 ~ 15498827 (+) |
| LOC110528871 | LOC105019803 | coding | upstream | 108829 | 15478409 ~ 15489245 (+) |
| ppp2r3a | ppp2r3a | coding | downstream | 7616 | 15605957 ~ 15647056 (+) |
| fndc3ba | LOC105019796 | coding | downstream | 51205 | 15649546 ~ 15814242 (+) |
| LOC110495697 | LOC106574566 | coding | downstream | 233469 | 15831810 ~ 15868293 (+) |
| LOC110495702 | LOC106574475 | coding | downstream | 274805 | 15873146 ~ 15883313 (+) |
| LOC110528900 | NA | coding | downstream | 311449 | 15903494 ~ 15927285 (+) |
| G578427 | NA | non-coding | upstream | 6477 | 15591389 ~ 15591597 (+) |
| G578356 | LOC106574468 | non-coding | upstream | 15441 | 15578936 ~ 15582633 (+) |
| G578423 | NA | non-coding | upstream | 29209 | 15567038 ~ 15568865 (+) |
| G578404 | NA | non-coding | upstream | 73259 | 15524265 ~ 15524815 (+) |
| G578398 | NA | non-coding | upstream | 89630 | 15508171 ~ 15508444 (+) |
| G578430 | NA | non-coding | downstream | 1396 | 15599737 ~ 15599961 (+) |
| G578431 | NA | non-coding | downstream | 5292 | 15603633 ~ 15603910 (+) |
| G578462 | NA | non-coding | downstream | 140053 | 15738394 ~ 15741466 (+) |
| G578463 | NA | non-coding | downstream | 140837 | 15739178 ~ 15741167 (+) |
| G578389 | NA | other | upstream | 133709 | 15462245 ~ 15464365 (+) |
| G578031 | NA | other | upstream | 341867 | 15255171 ~ 15256207 (+) |
| G577909 | NA | other | upstream | 583539 | 14972625 ~ 15014535 (+) |
| G577876 | LOC106575485 | other | upstream | 626467 | 14961205 ~ 14971607 (+) |
| LOC110528906 | LOC106574480 | other | downstream | 395317 | 15993464 ~ 16004993 (+) |
| LOC110528915 | LOC106574584 | other | downstream | 447942 | 16046065 ~ 16048048 (+) |
| LOC110528786 | omp-1 | other | downstream | 859704 | 16457220 ~ 16463699 (+) |
| G579566 | NA | other | downstream | 1220201 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 1444068 | 17042409 ~ 17097924 (+) |
