Gene
RNA
| Item | Value |
|---|---|
| gene id | G578479 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 15789314 ~ 15791417 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU659900 | True | 225 | lncRNA | 0.43 | 2 | 15789314 | 15791417 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp2r3a | ppp2r3a | coding | upstream | 142258 | 15605957 ~ 15647056 (+) |
| stag1a | LOC106575446 | coding | upstream | 213840 | 15530602 ~ 15575474 (+) |
| LOC110528898 | LOC106574671 | coding | upstream | 273628 | 15513865 ~ 15515686 (+) |
| LOC110528777 | LOC106575448 | coding | upstream | 284121 | 15499437 ~ 15505193 (+) |
| LOC110528902 | atr | coding | upstream | 290487 | 15492870 ~ 15498827 (+) |
| LOC110495697 | LOC106574566 | coding | downstream | 40393 | 15831810 ~ 15868293 (+) |
| LOC110495702 | LOC106574475 | coding | downstream | 81729 | 15873146 ~ 15883313 (+) |
| LOC110528900 | NA | coding | downstream | 118373 | 15903494 ~ 15927285 (+) |
| LOC110528779 | NA | coding | downstream | 142009 | 15933426 ~ 15935198 (+) |
| LOC110518760 | NA | coding | downstream | 150708 | 15942125 ~ 15943670 (+) |
| G578470 | NA | non-coding | upstream | 23770 | 15765064 ~ 15765544 (+) |
| G578464 | NA | non-coding | upstream | 47499 | 15741558 ~ 15741815 (+) |
| G578462 | NA | non-coding | upstream | 47848 | 15738394 ~ 15741466 (+) |
| G578463 | NA | non-coding | upstream | 48147 | 15739178 ~ 15741167 (+) |
| G578351 | NA | non-coding | downstream | 25169 | 15816586 ~ 15819486 (+) |
| G578496 | NA | non-coding | downstream | 55623 | 15847040 ~ 15860489 (+) |
| G578755 | NA | non-coding | downstream | 104019 | 15895436 ~ 15895784 (+) |
| G578761 | NA | non-coding | downstream | 117486 | 15908903 ~ 15933022 (+) |
| G578389 | NA | other | upstream | 324949 | 15462245 ~ 15464365 (+) |
| G578031 | NA | other | upstream | 533107 | 15255171 ~ 15256207 (+) |
| G577909 | NA | other | upstream | 774779 | 14972625 ~ 15014535 (+) |
| G577876 | LOC106575485 | other | upstream | 817707 | 14961205 ~ 14971607 (+) |
| LOC110528906 | LOC106574480 | other | downstream | 202241 | 15993464 ~ 16004993 (+) |
| LOC110528915 | LOC106574584 | other | downstream | 254866 | 16046065 ~ 16048048 (+) |
| LOC110528786 | omp-1 | other | downstream | 666628 | 16457220 ~ 16463699 (+) |
| G579566 | NA | other | downstream | 1027125 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 1250992 | 17042409 ~ 17097924 (+) |
