Gene
RNA
| Item | Value |
|---|---|
| gene id | G579043 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 15906425 ~ 15913280 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU660636 | True | 270 | lncRNA | 0.41 | 2 | 15906425 | 15913280 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497076 | LOC106574477 | coding | downstream | 11622 | 15884871 ~ 15894803 (-) |
| LOC110495701 | ghsr | coding | downstream | 75651 | 15827007 ~ 15830774 (-) |
| LOC110495705 | LOC106575419 | coding | downstream | 318056 | 15583137 ~ 15588369 (-) |
| LOC110495698 | LOC106574468 | coding | downstream | 323773 | 15578875 ~ 15582652 (-) |
| LOC118965258 | LOC106575449 | coding | downstream | 384227 | 15517843 ~ 15522198 (-) |
| LOC118965259 | NA | coding | upstream | 87172 | 16000452 ~ 16005279 (-) |
| LOC110528781 | LOC106575244 | coding | upstream | 134739 | 16048019 ~ 16064477 (-) |
| LOC110528908 | LOC106574585 | coding | upstream | 154602 | 16067882 ~ 16070915 (-) |
| LOC110528861 | LOC106575437 | coding | upstream | 184859 | 16098139 ~ 16116502 (-) |
| pdcd10b | LOC106574489 | coding | upstream | 266624 | 16179904 ~ 16192880 (-) |
| G578756 | NA | non-coding | downstream | 9936 | 15896268 ~ 15896489 (-) |
| G578752 | NA | non-coding | downstream | 23113 | 15880825 ~ 15883312 (-) |
| G578749 | NA | non-coding | downstream | 37145 | 15868969 ~ 15869280 (-) |
| G578742 | LOC106574566 | non-coding | downstream | 41993 | 15855222 ~ 15864432 (-) |
| G578743 | LOC106575426 | non-coding | downstream | 55936 | 15848253 ~ 15850489 (-) |
| G579029 | NA | non-coding | upstream | 3722 | 15917002 ~ 15971356 (-) |
| G579032 | NA | non-coding | upstream | 11680 | 15924960 ~ 15925395 (-) |
| G579070 | NA | non-coding | upstream | 74955 | 15988235 ~ 15989128 (-) |
| G579081 | NA | non-coding | upstream | 104266 | 16017546 ~ 16020140 (-) |
| G579086 | NA | non-coding | upstream | 122497 | 16035777 ~ 16036080 (-) |
| G578601 | NA | other | downstream | 279726 | 15626086 ~ 15626699 (-) |
| LOC118965257 | NA | other | downstream | 448750 | 15444105 ~ 15457675 (-) |
| LOC110515884 | LOC106575482 | other | downstream | 871158 | 15005430 ~ 15035345 (-) |
| G579102 | NA | other | upstream | 159589 | 16072869 ~ 16073146 (-) |
| G579125 | LOC106574487 | other | upstream | 216213 | 16129493 ~ 16130317 (-) |
| LOC110528887 | LOC106574501 | other | upstream | 405487 | 16316980 ~ 16320794 (-) |
| G579278 | NA | other | upstream | 551662 | 16464942 ~ 16465534 (-) |
| LOC110528867 | LOC106575374 | other | upstream | 646683 | 16559930 ~ 16635251 (-) |
