Gene
RNA
| Item | Value |
|---|---|
| gene id | G578904 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16228049 ~ 16228313 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU660425 | True | 265 | lncRNA | 0.42 | 1 | 16228049 | 16228313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528873 | ino1a | coding | upstream | 17884 | 16202189 ~ 16210165 (+) |
| LOC110528882 | LOC106574488 | coding | upstream | 51023 | 16161693 ~ 16177026 (+) |
| LOC110528863 | LOC106575439 | coding | upstream | 85858 | 16124275 ~ 16142191 (+) |
| LOC110528868 | prdm9 | coding | upstream | 130231 | 16078839 ~ 16097818 (+) |
| LOC110528915 | LOC106574584 | coding | upstream | 180001 | 16046065 ~ 16048048 (+) |
| LOC110528895 | LOC106574495 | coding | downstream | 1491 | 16229804 ~ 16268664 (+) |
| LOC110528905 | LOC106574496 | coding | downstream | 40887 | 16269200 ~ 16279190 (+) |
| LOC110528903 | LOC106574506 | coding | downstream | 116445 | 16344292 ~ 16356805 (+) |
| LOC110528784 | LOC106574508 | coding | downstream | 150043 | 16378356 ~ 16397842 (+) |
| LOC118965265 | LOC106575416 | coding | downstream | 197393 | 16425706 ~ 16428378 (+) |
| G578903 | NA | non-coding | upstream | 958 | 16226873 ~ 16227091 (+) |
| G578821 | NA | non-coding | upstream | 16049 | 16211609 ~ 16212000 (+) |
| G578893 | NA | non-coding | upstream | 26252 | 16201512 ~ 16201797 (+) |
| G578890 | NA | non-coding | upstream | 28796 | 16198946 ~ 16199253 (+) |
| G578863 | NA | non-coding | upstream | 46217 | 16154281 ~ 16181832 (+) |
| G578905 | NA | non-coding | downstream | 311 | 16228624 ~ 16228837 (+) |
| G578920 | NA | non-coding | downstream | 52729 | 16281042 ~ 16281272 (+) |
| G578934 | LOC106575386 | non-coding | downstream | 77383 | 16305696 ~ 16309378 (+) |
| G578936 | LOC106574500 | non-coding | downstream | 81908 | 16310221 ~ 16311581 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 223056 | 15993464 ~ 16004993 (+) |
| LOC110528902 | atr | other | upstream | 729463 | 15492870 ~ 15498827 (+) |
| G578389 | NA | other | upstream | 763684 | 15462245 ~ 15464365 (+) |
| G578031 | NA | other | upstream | 971842 | 15255171 ~ 15256207 (+) |
| LOC110528786 | omp-1 | other | downstream | 229732 | 16457220 ~ 16463699 (+) |
| G579566 | NA | other | downstream | 590229 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 814096 | 17042409 ~ 17097924 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 1105411 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 1170480 | 17398793 ~ 17400533 (+) |
