G579278


Basic Information

Item Value
gene id G579278
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16464942 ~ 16465534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU660944
ccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatgaagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatgaaatgtttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaattgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaaaggggctgaataattttgcacgcccaatttttcagttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU660944 True 593 TUCP 0.42 1 16464942 16465534

Neighbor

gene id symbol gene type direction distance location
LOC110528876 LOC106574510 coding downstream 18156 16438652 ~ 16446786 (-)
LOC118965347 LOC106574589 coding downstream 60742 16401119 ~ 16406055 (-)
LOC118965264 LOC106575381 coding downstream 131241 16327118 ~ 16333701 (-)
LOC110528901 LOC106575418 coding downstream 138373 16321126 ~ 16326569 (-)
LOC110528887 LOC106574501 coding downstream 144148 16316980 ~ 16320794 (-)
LOC110528867 LOC106575374 coding upstream 94396 16559930 ~ 16635251 (-)
LOC118936279 LOC106575378 coding upstream 118970 16584504 ~ 16587496 (-)
LOC118936280 LOC106575375 coding upstream 132832 16598366 ~ 16607601 (-)
LOC118936281 LOC106575370 coding upstream 170839 16636373 ~ 16646468 (-)
LOC110528860 LOC106575367 coding upstream 230705 16696239 ~ 16701916 (-)
G579277 NA non-coding downstream 159 16464121 ~ 16464783 (-)
G579274 NA non-coding downstream 6992 16457698 ~ 16457950 (-)
G579273 NA non-coding downstream 10949 16453675 ~ 16453993 (-)
G579272 NA non-coding downstream 11998 16452079 ~ 16452944 (-)
G579279 NA non-coding upstream 250 16465784 ~ 16466236 (-)
G579283 NA non-coding upstream 13620 16479154 ~ 16479520 (-)
G579294 NA non-coding upstream 43742 16509276 ~ 16509482 (-)
G579295 LOC106575379 non-coding upstream 70367 16535901 ~ 16537923 (-)
G579322 NA non-coding upstream 78494 16544028 ~ 16544235 (-)
G579125 LOC106574487 other downstream 334625 16129493 ~ 16130317 (-)
G579102 NA other downstream 391796 16072869 ~ 16073146 (-)
G579028 NA other downstream 501399 15897176 ~ 15963543 (-)
LOC110495701 ghsr other downstream 634984 15827007 ~ 15830774 (-)
LOC110527396 LOC106574529 other upstream 332146 16797680 ~ 16800686 (-)
G580487 NA other upstream 932323 17397857 ~ 17400536 (-)
G581089 LOC106575297 other upstream 1577393 18042927 ~ 18043380 (-)
G581174 LOC101077481 other upstream 1751624 18217158 ~ 18235038 (-)

Expression


Co-expression Network