Gene
RNA
| Item | Value |
|---|---|
| gene id | G579319 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16541841 ~ 16542062 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU660985 | True | 222 | lncRNA | 0.48 | 1 | 16541841 | 16542062 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528787 | LOC106575379 | coding | upstream | 3885 | 16510437 ~ 16537956 (+) |
| LOC110528786 | omp-1 | coding | upstream | 78142 | 16457220 ~ 16463699 (+) |
| LOC110528885 | c1ql2 | coding | upstream | 89791 | 16446388 ~ 16452050 (+) |
| d2hgdh | LOC106575380 | coding | upstream | 106127 | 16431284 ~ 16435714 (+) |
| LOC118965265 | LOC106575416 | coding | upstream | 113463 | 16425706 ~ 16428378 (+) |
| LOC110528859 | LOC106575376 | coding | downstream | 4253 | 16544860 ~ 16559294 (+) |
| LOC110528883 | ola1 | coding | downstream | 113024 | 16655086 ~ 16663049 (+) |
| LOC110528869 | LOC106574522 | coding | downstream | 121612 | 16663674 ~ 16671573 (+) |
| LOC110528893 | LOC105019901 | coding | downstream | 141020 | 16683082 ~ 16691072 (+) |
| LOC118965266 | NA | coding | downstream | 141279 | 16683341 ~ 16688245 (+) |
| G579020 | NA | non-coding | upstream | 32017 | 16509593 ~ 16509824 (+) |
| G579001 | NA | non-coding | upstream | 76291 | 16464952 ~ 16465550 (+) |
| G579000 | NA | non-coding | upstream | 77049 | 16464240 ~ 16464792 (+) |
| G578977 | LOC106575417 | non-coding | upstream | 142743 | 16398697 ~ 16399098 (+) |
| G579320 | NA | non-coding | downstream | 941 | 16543003 ~ 16543433 (+) |
| G579323 | NA | non-coding | downstream | 2483 | 16544545 ~ 16544787 (+) |
| G579326 | NA | non-coding | downstream | 17401 | 16559463 ~ 16561262 (+) |
| G579346 | NA | non-coding | downstream | 49700 | 16591762 ~ 16591984 (+) |
| LOC110528915 | LOC106574584 | other | upstream | 493834 | 16046065 ~ 16048048 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 536848 | 15993464 ~ 16004993 (+) |
| LOC110528902 | atr | other | upstream | 1043255 | 15492870 ~ 15498827 (+) |
| G578389 | NA | other | upstream | 1077476 | 15462245 ~ 15464365 (+) |
| G579566 | NA | other | downstream | 276480 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 500347 | 17042409 ~ 17097924 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 791662 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 856731 | 17398793 ~ 17400533 (+) |
| G580315 | LOC106575303 | other | downstream | 1128213 | 17670275 ~ 17680668 (+) |
