G579323


Basic Information

Item Value
gene id G579323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16544545 ~ 16544787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU660989
tcgaatactttcgcaaggcactgtacatattacaTCAATCACCTCAACTatctcatacccctgcacattgactcagtactggtactccttgtatatagtctcattattgttatttgatTGTGATACTATTTCCTTTTTTGATAATTTGTCTTTCTTTTTAACTTTTTAACTGAAGGACTTGAAaacaaagcatttcatggtaaagtctacacctgttgtattcggtgcatgtgaaaaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU660989 True 243 lncRNA 0.33 1 16544545 16544787

Neighbor

gene id symbol gene type direction distance location
LOC110528787 LOC106575379 coding upstream 6589 16510437 ~ 16537956 (+)
LOC110528786 omp-1 coding upstream 80846 16457220 ~ 16463699 (+)
LOC110528885 c1ql2 coding upstream 92495 16446388 ~ 16452050 (+)
d2hgdh LOC106575380 coding upstream 108831 16431284 ~ 16435714 (+)
LOC118965265 LOC106575416 coding upstream 116167 16425706 ~ 16428378 (+)
LOC110528859 LOC106575376 coding downstream 1528 16544860 ~ 16559294 (+)
LOC110528883 ola1 coding downstream 110299 16655086 ~ 16663049 (+)
LOC110528869 LOC106574522 coding downstream 118887 16663674 ~ 16671573 (+)
LOC110528893 LOC105019901 coding downstream 138295 16683082 ~ 16691072 (+)
LOC118965266 NA coding downstream 138554 16683341 ~ 16688245 (+)
G579320 NA non-coding upstream 1112 16543003 ~ 16543433 (+)
G579319 NA non-coding upstream 2483 16541841 ~ 16542062 (+)
G579020 NA non-coding upstream 34721 16509593 ~ 16509824 (+)
G579001 NA non-coding upstream 78995 16464952 ~ 16465550 (+)
G579000 NA non-coding upstream 79753 16464240 ~ 16464792 (+)
G579326 NA non-coding downstream 14676 16559463 ~ 16561262 (+)
G579346 NA non-coding downstream 46975 16591762 ~ 16591984 (+)
G579348 NA non-coding downstream 48627 16593414 ~ 16593919 (+)
G579349 NA non-coding downstream 52015 16596802 ~ 16597223 (+)
LOC110528915 LOC106574584 other upstream 496538 16046065 ~ 16048048 (+)
LOC110528906 LOC106574480 other upstream 539552 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 1045959 15492870 ~ 15498827 (+)
G578389 NA other upstream 1080180 15462245 ~ 15464365 (+)
G579566 NA other downstream 273755 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 497622 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 788937 17333699 ~ 17336419 (+)
G580179 NA other downstream 854006 17398793 ~ 17400533 (+)
G580315 LOC106575303 other downstream 1125488 17670275 ~ 17680668 (+)

Expression


Co-expression Network