Gene
RNA
| Item | Value |
|---|---|
| gene id | G579346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16591762 ~ 16591984 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU661021 | True | 223 | lncRNA | 0.47 | 1 | 16591762 | 16591984 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528859 | LOC106575376 | coding | upstream | 32468 | 16544860 ~ 16559294 (+) |
| LOC110528787 | LOC106575379 | coding | upstream | 53806 | 16510437 ~ 16537956 (+) |
| LOC110528786 | omp-1 | coding | upstream | 128063 | 16457220 ~ 16463699 (+) |
| LOC110528885 | c1ql2 | coding | upstream | 139712 | 16446388 ~ 16452050 (+) |
| d2hgdh | LOC106575380 | coding | upstream | 156048 | 16431284 ~ 16435714 (+) |
| LOC110528883 | ola1 | coding | downstream | 63102 | 16655086 ~ 16663049 (+) |
| LOC110528869 | LOC106574522 | coding | downstream | 71690 | 16663674 ~ 16671573 (+) |
| LOC110528893 | LOC105019901 | coding | downstream | 91098 | 16683082 ~ 16691072 (+) |
| LOC118965266 | NA | coding | downstream | 91357 | 16683341 ~ 16688245 (+) |
| LOC110528788 | NA | coding | downstream | 155431 | 16747415 ~ 16763145 (+) |
| G579326 | NA | non-coding | upstream | 30500 | 16559463 ~ 16561262 (+) |
| G579323 | NA | non-coding | upstream | 46975 | 16544545 ~ 16544787 (+) |
| G579320 | NA | non-coding | upstream | 48329 | 16543003 ~ 16543433 (+) |
| G579319 | NA | non-coding | upstream | 49700 | 16541841 ~ 16542062 (+) |
| G579348 | NA | non-coding | downstream | 1430 | 16593414 ~ 16593919 (+) |
| G579349 | NA | non-coding | downstream | 4818 | 16596802 ~ 16597223 (+) |
| G579350 | NA | non-coding | downstream | 6008 | 16597992 ~ 16598298 (+) |
| G579329 | LOC106575375 | non-coding | downstream | 6558 | 16598542 ~ 16600963 (+) |
| G579354 | NA | non-coding | downstream | 15025 | 16607009 ~ 16607296 (+) |
| LOC110528915 | LOC106574584 | other | upstream | 543755 | 16046065 ~ 16048048 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 586769 | 15993464 ~ 16004993 (+) |
| LOC110528902 | atr | other | upstream | 1093176 | 15492870 ~ 15498827 (+) |
| G578389 | NA | other | upstream | 1127397 | 15462245 ~ 15464365 (+) |
| G579566 | NA | other | downstream | 226558 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 450425 | 17042409 ~ 17097924 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 741740 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 806809 | 17398793 ~ 17400533 (+) |
| G580315 | LOC106575303 | other | downstream | 1078291 | 17670275 ~ 17680668 (+) |
