G579357


Basic Information

Item Value
gene id G579357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16609512 ~ 16609872 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU661035
tagtagtacacagcgttgtacgagatcttcaatttctcacatggaatagccttaatttctcagaacaagaatagattgacgaGTTTCAGATGAAAGTTTTGTTtttagccattttgagcctgtaatcgaacccacaaatgatgatgctccagatactcaactagtctaaagaaggccagttttattgcttctttaaaatcagcacaacagttttcagctgtgctaacataattgcaaaagggttttataatgatcaattagcccttttaaattatcaacttggattagctaacacaacgtgccattggaacacaggagtgacggttgctgataatgggcctctgtctatgtagatattcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU661035 True 361 lncRNA 0.37 1 16609512 16609872

Neighbor

gene id symbol gene type direction distance location
LOC110528859 LOC106575376 coding upstream 50218 16544860 ~ 16559294 (+)
LOC110528787 LOC106575379 coding upstream 71556 16510437 ~ 16537956 (+)
LOC110528786 omp-1 coding upstream 145813 16457220 ~ 16463699 (+)
LOC110528885 c1ql2 coding upstream 157462 16446388 ~ 16452050 (+)
d2hgdh LOC106575380 coding upstream 173798 16431284 ~ 16435714 (+)
LOC110528883 ola1 coding downstream 45214 16655086 ~ 16663049 (+)
LOC110528869 LOC106574522 coding downstream 53802 16663674 ~ 16671573 (+)
LOC110528893 LOC105019901 coding downstream 73210 16683082 ~ 16691072 (+)
LOC118965266 NA coding downstream 73469 16683341 ~ 16688245 (+)
LOC110528788 NA coding downstream 137543 16747415 ~ 16763145 (+)
G579354 NA non-coding upstream 2216 16607009 ~ 16607296 (+)
G579329 LOC106575375 non-coding upstream 8549 16598542 ~ 16600963 (+)
G579350 NA non-coding upstream 11214 16597992 ~ 16598298 (+)
G579349 NA non-coding upstream 12289 16596802 ~ 16597223 (+)
G579348 NA non-coding upstream 15593 16593414 ~ 16593919 (+)
G579360 NA non-coding downstream 1463 16611335 ~ 16611546 (+)
G579325 LOC106574519 non-coding downstream 29196 16639068 ~ 16639297 (+)
G579335 LOC106574517 non-coding downstream 30167 16640039 ~ 16640494 (+)
G579383 NA non-coding downstream 38126 16647998 ~ 16648233 (+)
G579385 NA non-coding downstream 42433 16652305 ~ 16652529 (+)
LOC110528915 LOC106574584 other upstream 561505 16046065 ~ 16048048 (+)
LOC110528906 LOC106574480 other upstream 604519 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 1110926 15492870 ~ 15498827 (+)
G578389 NA other upstream 1145147 15462245 ~ 15464365 (+)
G579566 NA other downstream 208670 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 432537 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 723852 17333699 ~ 17336419 (+)
G580179 NA other downstream 788921 17398793 ~ 17400533 (+)
G580315 LOC106575303 other downstream 1060403 17670275 ~ 17680668 (+)

Expression


Co-expression Network