G579385


Basic Information

Item Value
gene id G579385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16652305 ~ 16652529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU661066
gtagtcaatgaacagaattctcacataggcgttccttttgtccagggcaggtgtggagtgcgattgcatcatctgtggatctgttgggatggtatgcaaattggagtgggtctaggatgtccgggaggatgctgttgatgtgagccatgaacagcctttcaaagcacttcatggctaccgacgtgagtgccacggggcggtaatcatttaggcaggttatggtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU661066 True 225 lncRNA 0.51 1 16652305 16652529

Neighbor

gene id symbol gene type direction distance location
LOC110528859 LOC106575376 coding upstream 93011 16544860 ~ 16559294 (+)
LOC110528787 LOC106575379 coding upstream 114349 16510437 ~ 16537956 (+)
LOC110528786 omp-1 coding upstream 188606 16457220 ~ 16463699 (+)
LOC110528885 c1ql2 coding upstream 200255 16446388 ~ 16452050 (+)
d2hgdh LOC106575380 coding upstream 216591 16431284 ~ 16435714 (+)
LOC110528883 ola1 coding downstream 2557 16655086 ~ 16663049 (+)
LOC110528869 LOC106574522 coding downstream 11145 16663674 ~ 16671573 (+)
LOC110528893 LOC105019901 coding downstream 30553 16683082 ~ 16691072 (+)
LOC118965266 NA coding downstream 30812 16683341 ~ 16688245 (+)
LOC110528788 NA coding downstream 94886 16747415 ~ 16763145 (+)
G579383 NA non-coding upstream 4072 16647998 ~ 16648233 (+)
G579335 LOC106574517 non-coding upstream 11811 16640039 ~ 16640494 (+)
G579325 LOC106574519 non-coding upstream 13008 16639068 ~ 16639297 (+)
G579360 NA non-coding upstream 40759 16611335 ~ 16611546 (+)
G579357 NA non-coding upstream 42433 16609512 ~ 16609872 (+)
G579389 NA non-coding downstream 38759 16691288 ~ 16692003 (+)
G579400 LOC106574524 non-coding downstream 47060 16699589 ~ 16699831 (+)
G579404 LOC106574525 non-coding downstream 54747 16707276 ~ 16708204 (+)
G579509 LOC106574571 non-coding downstream 60412 16712941 ~ 16713968 (+)
LOC110528915 LOC106574584 other upstream 604298 16046065 ~ 16048048 (+)
LOC110528906 LOC106574480 other upstream 647312 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 1153719 15492870 ~ 15498827 (+)
G578389 NA other upstream 1187940 15462245 ~ 15464365 (+)
G579566 NA other downstream 166013 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 389880 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 681195 17333699 ~ 17336419 (+)
G580179 NA other downstream 746264 17398793 ~ 17400533 (+)
G580315 LOC106575303 other downstream 1017746 17670275 ~ 17680668 (+)

Expression


Co-expression Network