G579567


Basic Information

Item Value
gene id G579567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16826462 ~ 16827211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU661301
cagacacacacaaacggacagacagacagacacagacagacagacagacagacagacagacagacagacagacagacagacacactgacacagacagacacactgacacagacagacacacggacacacagacagacagacagacagacagacagacagacagacagacagacagacaggcacgcacgcacgcacacacacacacacactgaccggCTGATGAAGTCTTTGAAGGTTCTGCGGACAGGGAAGCCGGCCCGGCGGATCTTAACTGTTTCTAACATTCCAGAATACCTCAGCTGGTTCAGAACCACTTCCGGGTCAAACACGCTAGGGTTCTACACGGGTCACAGGTCAGAGGTGTTTGGTTACAATAAGTTGTTCTGATATACATTTGTGTCACCCTATGTTCAAGGAGCTTGATGTCTGGTAAAGAGTGTCTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU661301 True 444 lncRNA 0.50 2 16826462 16827211

Neighbor

gene id symbol gene type direction distance location
LOC110528788 NA coding upstream 63317 16747415 ~ 16763145 (+)
LOC110528893 LOC105019901 coding upstream 135390 16683082 ~ 16691072 (+)
LOC118965266 NA coding upstream 138217 16683341 ~ 16688245 (+)
LOC110528869 LOC106574522 coding upstream 154889 16663674 ~ 16671573 (+)
LOC110528883 ola1 coding upstream 163413 16655086 ~ 16663049 (+)
LOC110528796 LOC106574532 coding downstream 79488 16906699 ~ 16920069 (+)
trnak-uuu NA coding downstream 98459 16925670 ~ 16925742 (+)
trnak-uuu-2 NA coding downstream 100005 16927216 ~ 16927288 (+)
trnak-cuu NA coding downstream 103056 16930267 ~ 16930339 (+)
trnan-guu-2 NA coding downstream 103813 16931024 ~ 16931097 (+)
G579566 NA non-coding upstream 6572 16818542 ~ 16819890 (+)
G579556 NA non-coding upstream 23103 16801783 ~ 16803359 (+)
G579507 NA non-coding upstream 25848 16799416 ~ 16800614 (+)
G579553 NA non-coding upstream 30918 16795319 ~ 16795544 (+)
G579510 NA non-coding upstream 61854 16763451 ~ 16764608 (+)
G579571 NA non-coding downstream 628 16827839 ~ 16828043 (+)
G579574 LOC106574531 non-coding downstream 2606 16829817 ~ 16830514 (+)
G579575 NA non-coding downstream 4715 16831926 ~ 16832209 (+)
G579577 NA non-coding downstream 7858 16835069 ~ 16835561 (+)
G579581 NA non-coding downstream 20881 16848092 ~ 16848474 (+)
LOC110528786 omp-1 other upstream 362770 16457220 ~ 16463699 (+)
LOC110528915 LOC106574584 other upstream 778455 16046065 ~ 16048048 (+)
LOC110528906 LOC106574480 other upstream 821469 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 1327876 15492870 ~ 15498827 (+)
LOC110527403 LOC106574539 other downstream 215198 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 506513 17333699 ~ 17336419 (+)
G580179 NA other downstream 571582 17398793 ~ 17400533 (+)
G580315 LOC106575303 other downstream 843064 17670275 ~ 17680668 (+)
G580365 NA other downstream 986131 17813342 ~ 17816848 (+)

Expression


Co-expression Network