XLOC_025196 (stk17al)


Basic Information

Item Value
gene id XLOC_025196
gene name stk17al
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 16841942 ~ 16872909 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049753
CGCATTCTCAAACGGAGTTACCGCTGGCTGGACGTGCACTCACCGCTCATCTGTCGCGGCTCTAATTGAGTTCTTGCTCCGGTGAACGGCTGGCATCATCCCGCAGCAGGACTTAAACGGCAAAATGATGAACAGGAACGGAATGGTCACAAAAATCCGCACTCGGATAAGGACCGACCCCTTCAAGAACAACTATGACCTGGTCGGCAGAGAGCTTGGCAGGGGCAAATTTGCAGTGGTAAAGAAGTGTGTGGAGAAAACTACCGGCAAGGAGCATGCAGCGAAGTTCCTGCGAAAGAGGAGGAAGGGTCAGGACTGCCGAGGCGATATCCTCAATGAAATCGCGGTTCTGGAGTCGGCAGAGGCCAATCCTTATGTGGTGGGGCTGCATGAGGTTTACGAGACCACCTCGGAGATCATCCTCGTCCTGGAGTGTGCTGCCGGAGGTGAAATTTTCAATCAGTGCGTTGCCGATAATGACGAGGCTTTCACAGAGAAAGATGTCATCCGATTGGCTAGGCAGATTCTGATGGGCGTGTCCTGTCTCCATCAAAACAACATAGTTCATTTGGACTTGAAGCCTCAGAACATCCTGTTGACGAGCGCTCAGCCGCTGGGTGACATCCGTATCGTGGATTTCGGCTTATCTCGGCGGGTGGACAGCGTGTCAGAGGTTCGGGAGATCCTGGGCACTCCTGAATATGTGGCTCCTGAGATCCTGGACTATGAGCCCATCAGCACAGCTACTGACATGTGGAGCATTGGGGTACTGACATATGTGATGCTGACTGGCGAGTCTCCTTTTCTGGGAGAGGAAAAGCAGGAGACCTTCCTGAACATCTCGCAGGTGAACGTGGACTACTCGCAGGATGTCTTCCAGGGCATCTCTGACCTCGCAGTGAACTTCATCCAGTCTCTACTCATCAAAAACCCCAGAAAGCGCTCAACCGTGGAGCAGTGTTTAAATCACTCCTGGTTAAGACTAGACTCTCTCCACCAGACAGTAGACACTTGTCTCGAAGAGCAGGAAGCCAGTCAGTCCGAATCAGAGCCCGAAAGCCCCGTCCCATCCCCAGAACTGCTCATCCTGCCTTCATATCCAACCTGCCCCGGTCAGGGGGAGCTAAAAACAGGCCGGGACACTTTCAGCTTCACAGAGCCCTTCTCTCCTCATCCCGAAATACAAGAGCTCATCTATTAATCACAGAATCTGAGGAACAGAAAATAAACTGATACGGTCTAGTTTAAACTGGACATCAGCGTCGTCAGATTGTGTGGGGTGTGTAACCGTCCAGATTTATGAATGTGATGACCACAGAAagcgcatgtgtgtgtgggtCTAAAACAGATCTGAGATTTTAagctcttaaagggacagctcacccaaAAGTGAATTATTTATGATTTCCTCTTCCTCAAGAGACTTTCAAACTTGTATGATGtgatttcttttgttaaacacaaaagaagatatttagaaatatgataaccctgtaaccattgacgtacATATTAGgaaaaactaattttataaaAGTCATTGTTTAAAAGAGGGTTTGAAAAATGATAAAGATCtgtaacttccatagtaggaaaaacaaattccatggaagtcaatggttacagatctttagcatttttcaaatgatcttcttttgtgttcaacagaagaaaagtgAAGCATGAGTtcaaaaaaatgctatttttggtGATCTGTTTCTTTAAATAAGGCTCTTGTTTGAGGTTGTGAACTCCTCAGATCGCAGTAATGTACCGTTTCTGGTTTTAAAGTGGATCACACCTTCTCTGCTGTCTGAACTCGCTCAAAGTCGAAGTCTTCTCTGGAAGTGCCTGCTGCATCTGAGGAAGGAAACCAACGATCTTTGTCTCCTCATCGCTCTTCGTTGGGACTGTCGTGTTATGATATGCAATGAAGAATCGATGCTGCCTCTTTCCTCTGGACTGTATATGGACATCTTCATTCTGATTCTTTACAAACAGATTCACAGACTACTTTCGTTCTAGCACTTTtggtggggaaaaaaacaaaacgtgtATTAAAGTCTCCCAACAAGCACAGGTTAATTCGTACAGTCACTGTGTGTTTGGTTTCTCACACCACTGCTTGTATTCATTCCTGTTCTTATTCATAACAAGTTTGCTATAATTGCACAAATGTcctgtgtgtttgttgttttagAAGGGCATTGTTTGTTTTTGCCTTGGTGTTTTAATATCTTCTCTGTGTTGTTTTTTGAATGTCTGGAAGGGCATCGAGGAGGGAAATTTTCCAACTTGTCAGTAATATTTTGTGGCTGACTAAGAGATTTTCGGACCATTGTGGGAGAGATGTGTTTGCATGTTCAGAAGAACAGAGCATATAAAAATAAGGCTTTGATTTATTGTATAGTTTTTATGTTAAAGAaaggaatgtaaaaaaaaaaagtatttttctaCTGTTGtgctattttataaataatatgagaaaataaattgtaatattaatgtagatctttgttttcttttttgttttgtttttttaaccagcTGTGCTTATAAAAAGTTTGCACTTGTGTCCGGTCGGACTACTTATATGTATTATTGGCATGCCTGGCAAGatactgaagaaaataaatgatcatttttgtATTAAACTGA
>TCONS_00049754
GTGCACTCACCGCTCATCTGTCGCGGCTCTAATTGAGTTCTGTGAGTTTCTCCGACACCGTAAATTAGATTGTACAGCATTTCCACGGCTGGGTTAAACTTGTGCTTGTGAAAAAGACGgatattttttgcttttgaaaCTAATTTCTCTAAGCATCATCACTTTTTTTTGCTCCCCAGCCGGTTTGAATAGTAGTCTATGGTAGTGACCTGATGGACTAAACTCTTATATTTGTACCCAGTGCTCCGGTGAACGGCTGGCATCATCCCGCAGCAGGACTTAAACGGCAAAATGATGAACAGGAACGGAATGGTCACAAAAATCCGCACTCGGATAAGGACCGACCCCTTCAAGAACAACTATGACCTGGTCGGCAGAGAGCTTGGCAGGGGCAAATTTGCAGTGGTAAAGAAGTGTGTGGAGAAAACTACCGGCAAGGAGCATGCAGCGAAGTTCCTGCGAAAGAGGAGGAAGGGTCAGGACTGCCGAGGCGATATCCTCAATGAAATCGCGGTTCTGGAGTCGGCAGAGGCCAATCCTTATGTGGTGGGGCTGCATGAGGTTTACGAGACCACCTCGGAGATCATCCTCGTCCTGGAGTGTGCTGCCGGAGGTGAAATTTTCAATCAGTGCGTTGCCGATAATGACGAGGCTTTCACAGAGAAAGATGTCATCCGATTGGCTAGGCAGATTCTGATGGGCGTGTCCTGTCTCCATCAAAACAACATAGTTCATTTGGACTTGAA

Function

symbol description
stk17al Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061103-427 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK17B (serine/threonine kinase 17b).

Ensembl:

ensembl_id ENSDARG00000015922

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049753 False 2658 mRNA 0.43 8 16841942 16872909
TCONS_00049754 True 746 mRNA 0.48 3 16841975 16863541

Neighbor

gene id symbol gene type direction distance location
XLOC_025195 lrrc3cb coding upstream 67868 16771797 ~ 16774074 (+)
XLOC_025194 tmem86b coding upstream 71624 16762483 ~ 16770318 (+)
XLOC_025193 gys1 coding upstream 91906 16722014 ~ 16750036 (+)
XLOC_025192 zgc:55558 coding upstream 158319 16662209 ~ 16683623 (+)
XLOC_025191 slc17a7a coding upstream 187854 16612574 ~ 16654088 (+)
XLOC_025197 BX470185.1 coding downstream 1492 16874401 ~ 16883304 (+)
XLOC_025198 atp6v0a1a coding downstream 49317 16922226 ~ 16973125 (+)
XLOC_025199 cavin1a coding downstream 103186 16976095 ~ 17012340 (+)
XLOC_025200 stat3 coding downstream 157756 17030665 ~ 17107445 (+)
XLOC_025201 stat5a coding downstream 378633 17251542 ~ 17331919 (+)
XLOC_025429 BX649540.1 misc downstream 13375830 30248739 ~ 30249036 (+)
XLOC_025188 CR388224.1 non-coding upstream 468815 16373012 ~ 16373127 (+)
XLOC_025185 NA non-coding upstream 600602 16186593 ~ 16241340 (+)
XLOC_025184 NA non-coding upstream 680483 16153224 ~ 16161459 (+)
XLOC_025183 CR387933.1 non-coding upstream 786210 16055009 ~ 16055732 (+)
XLOC_025180 NA non-coding upstream 975540 15865921 ~ 15866402 (+)
XLOC_025203 CU207238.1 non-coding downstream 522330 17395239 ~ 17461885 (+)
XLOC_025215 NA non-coding downstream 1167704 18040613 ~ 18061783 (+)
XLOC_025218 NA non-coding downstream 1316700 18189609 ~ 18197126 (+)
XLOC_025227 NA non-coding downstream 1797915 18670824 ~ 18672291 (+)

Expression


Co-expression Network