G579581


Basic Information

Item Value
gene id G579581
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16848092 ~ 16848474 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU661323
tctctctctctctgtttgtctgtctgtctctctctctctctgtctgtctgtctctctctctctgtttgtctgtctctctctctctctctgtctgtctgtctctctctctctctctgtctctctctctctctcccctctctgtctttctctctctctctctctctgtctgtctctctctctctctcccctctctttctctctctctcccctctctgtctgtctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU661323 True 223 lncRNA 0.50 2 16848092 16848474

Neighbor

gene id symbol gene type direction distance location
LOC110528788 NA coding upstream 84947 16747415 ~ 16763145 (+)
LOC110528893 LOC105019901 coding upstream 157020 16683082 ~ 16691072 (+)
LOC118965266 NA coding upstream 159847 16683341 ~ 16688245 (+)
LOC110528869 LOC106574522 coding upstream 176519 16663674 ~ 16671573 (+)
LOC110528883 ola1 coding upstream 185043 16655086 ~ 16663049 (+)
LOC110528796 LOC106574532 coding downstream 58225 16906699 ~ 16920069 (+)
trnak-uuu NA coding downstream 77196 16925670 ~ 16925742 (+)
trnak-uuu-2 NA coding downstream 78742 16927216 ~ 16927288 (+)
trnak-cuu NA coding downstream 81793 16930267 ~ 16930339 (+)
trnan-guu-2 NA coding downstream 82550 16931024 ~ 16931097 (+)
G579577 NA non-coding upstream 12531 16835069 ~ 16835561 (+)
G579575 NA non-coding upstream 15883 16831926 ~ 16832209 (+)
G579574 LOC106574531 non-coding upstream 17578 16829817 ~ 16830514 (+)
G579571 NA non-coding upstream 20049 16827839 ~ 16828043 (+)
G579567 NA non-coding upstream 20881 16826462 ~ 16827211 (+)
G579600 NA non-coding downstream 11106 16859580 ~ 16860072 (+)
G579596 NA non-coding downstream 84657 16933131 ~ 16938136 (+)
G579638 NA non-coding downstream 126658 16975132 ~ 16975406 (+)
G579639 NA non-coding downstream 130203 16978677 ~ 16978965 (+)
G579591 NA non-coding downstream 168045 17016519 ~ 17019766 (+)
G579566 NA other upstream 28202 16818542 ~ 16819890 (+)
LOC110528786 omp-1 other upstream 384400 16457220 ~ 16463699 (+)
LOC110528915 LOC106574584 other upstream 800085 16046065 ~ 16048048 (+)
LOC110528906 LOC106574480 other upstream 843099 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 1349506 15492870 ~ 15498827 (+)
LOC110527403 LOC106574539 other downstream 193935 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 485250 17333699 ~ 17336419 (+)
G580179 NA other downstream 550319 17398793 ~ 17400533 (+)
G580315 LOC106575303 other downstream 821801 17670275 ~ 17680668 (+)
G580365 NA other downstream 964868 17813342 ~ 17816848 (+)

Expression


Co-expression Network