Gene
RNA
| Item | Value |
|---|---|
| gene id | G579660 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17097995 ~ 17098714 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU661422 | True | 720 | lncRNA | 0.40 | 1 | 17097995 | 17098714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527403 | LOC106574539 | coding | upstream | 466 | 17042409 ~ 17097924 (+) |
| LOC110527402 | LOC106575321 | coding | upstream | 38576 | 17057757 ~ 17065172 (+) |
| LOC110528797 | LOC106575326 | coding | upstream | 82448 | 17002517 ~ 17015547 (+) |
| LOC110527400 | LOC106575325 | coding | upstream | 98501 | 16948114 ~ 16999494 (+) |
| LOC110527399 | LOC106574533 | coding | upstream | 150234 | 16940571 ~ 16947761 (+) |
| LOC110527404 | LOC106575319 | coding | downstream | 9950 | 17108664 ~ 17158356 (+) |
| LOC110528798 | poglut1 | coding | downstream | 88404 | 17187118 ~ 17189472 (+) |
| LOC110527406 | cc001 | coding | downstream | 90818 | 17189532 ~ 17197507 (+) |
| LOC110528799 | LOC106575315 | coding | downstream | 118214 | 17216928 ~ 17260295 (+) |
| LOC118965348 | LOC106574556 | coding | downstream | 223951 | 17322665 ~ 17326351 (+) |
| G579651 | NA | non-coding | upstream | 65776 | 17031291 ~ 17032219 (+) |
| G579591 | NA | non-coding | upstream | 78229 | 17016519 ~ 17019766 (+) |
| G579639 | NA | non-coding | upstream | 119030 | 16978677 ~ 16978965 (+) |
| G579638 | NA | non-coding | upstream | 122589 | 16975132 ~ 16975406 (+) |
| G579695 | NA | non-coding | downstream | 6966 | 17105680 ~ 17106057 (+) |
| G579696 | NA | non-coding | downstream | 9532 | 17108246 ~ 17108491 (+) |
| G579697 | NA | non-coding | downstream | 10385 | 17109099 ~ 17109383 (+) |
| G579704 | NA | non-coding | downstream | 21071 | 17119785 ~ 17120071 (+) |
| G579708 | NA | non-coding | downstream | 25915 | 17124629 ~ 17124901 (+) |
| G579566 | NA | other | upstream | 278105 | 16818542 ~ 16819890 (+) |
| LOC110528786 | omp-1 | other | upstream | 634303 | 16457220 ~ 16463699 (+) |
| LOC110528915 | LOC106574584 | other | upstream | 1049988 | 16046065 ~ 16048048 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 1093002 | 15993464 ~ 16004993 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 235010 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 300079 | 17398793 ~ 17400533 (+) |
| G580315 | LOC106575303 | other | downstream | 571561 | 17670275 ~ 17680668 (+) |
| G580365 | NA | other | downstream | 714628 | 17813342 ~ 17816848 (+) |
| G580997 | NA | other | downstream | 1393513 | 18492227 ~ 18492909 (+) |
