Gene
RNA
| Item | Value |
|---|---|
| gene id | G579704 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17119785 ~ 17120071 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU661469 | True | 287 | lncRNA | 0.41 | 1 | 17119785 | 17120071 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527403 | LOC106574539 | coding | upstream | 22256 | 17042409 ~ 17097924 (+) |
| LOC110527402 | LOC106575321 | coding | upstream | 60366 | 17057757 ~ 17065172 (+) |
| LOC110528797 | LOC106575326 | coding | upstream | 104238 | 17002517 ~ 17015547 (+) |
| LOC110527400 | LOC106575325 | coding | upstream | 120291 | 16948114 ~ 16999494 (+) |
| LOC110527399 | LOC106574533 | coding | upstream | 172024 | 16940571 ~ 16947761 (+) |
| LOC110528798 | poglut1 | coding | downstream | 67047 | 17187118 ~ 17189472 (+) |
| LOC110527406 | cc001 | coding | downstream | 69461 | 17189532 ~ 17197507 (+) |
| LOC110528799 | LOC106575315 | coding | downstream | 96857 | 17216928 ~ 17260295 (+) |
| LOC118965348 | LOC106574556 | coding | downstream | 202594 | 17322665 ~ 17326351 (+) |
| LOC110527408 | LOC106574552 | coding | downstream | 208809 | 17328880 ~ 17331837 (+) |
| G579697 | NA | non-coding | upstream | 10402 | 17109099 ~ 17109383 (+) |
| G579696 | NA | non-coding | upstream | 11294 | 17108246 ~ 17108491 (+) |
| G579695 | NA | non-coding | upstream | 13728 | 17105680 ~ 17106057 (+) |
| G579660 | NA | non-coding | upstream | 21071 | 17097995 ~ 17098714 (+) |
| G579708 | NA | non-coding | downstream | 4558 | 17124629 ~ 17124901 (+) |
| G579717 | NA | non-coding | downstream | 19438 | 17139509 ~ 17139733 (+) |
| LOC110527404 | LOC106575319 | non-coding | downstream | 37806 | 17108664 ~ 17158356 (+) |
| G579684 | NA | non-coding | downstream | 38664 | 17158735 ~ 17160551 (+) |
| G579945 | NA | non-coding | downstream | 42636 | 17162707 ~ 17163035 (+) |
| G579566 | NA | other | upstream | 299895 | 16818542 ~ 16819890 (+) |
| LOC110528786 | omp-1 | other | upstream | 656093 | 16457220 ~ 16463699 (+) |
| LOC110528915 | LOC106574584 | other | upstream | 1071778 | 16046065 ~ 16048048 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 1114792 | 15993464 ~ 16004993 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 213653 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 278722 | 17398793 ~ 17400533 (+) |
| G580315 | LOC106575303 | other | downstream | 550204 | 17670275 ~ 17680668 (+) |
| G580365 | NA | other | downstream | 693271 | 17813342 ~ 17816848 (+) |
| G580997 | NA | other | downstream | 1372156 | 18492227 ~ 18492909 (+) |
