Gene
RNA
| Item | Value |
|---|---|
| gene id | G579936 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17152403 ~ 17153054 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vang-like protein 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU661743 | True | 396 | lncRNA | 0.56 | 2 | 17152403 | 17153054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hpxb | LOC106575321 | coding | downstream | 87271 | 17058930 ~ 17065132 (-) |
| LOC110527401 | LOC106575324 | coding | downstream | 99811 | 17016485 ~ 17052592 (-) |
| trnan-guu | NA | coding | downstream | 221670 | 16930660 ~ 16930733 (-) |
| LOC110528795 | LOC106574531 | coding | downstream | 259584 | 16807666 ~ 16892819 (-) |
| LOC110527397 | LOC106574530 | coding | downstream | 344843 | 16801770 ~ 16807560 (-) |
| LOC110527405 | LOC106575318 | coding | upstream | 12119 | 17165173 ~ 17176553 (-) |
| LOC100653440 | LOC106575314 | coding | upstream | 109126 | 17262180 ~ 17288455 (-) |
| LOC118965375 | NA | coding | upstream | 144380 | 17297360 ~ 17299895 (-) |
| LOC110527097 | NA | coding | upstream | 156398 | 17309452 ~ 17313107 (-) |
| LOC110527407 | LOC106574547 | coding | upstream | 183317 | 17336371 ~ 17351568 (-) |
| G579922 | NA | non-coding | downstream | 16100 | 17136088 ~ 17136303 (-) |
| G579917 | NA | non-coding | downstream | 20819 | 17131380 ~ 17131584 (-) |
| G579916 | NA | non-coding | downstream | 21895 | 17130273 ~ 17130508 (-) |
| G579915 | NA | non-coding | downstream | 22808 | 17129020 ~ 17129595 (-) |
| G579908 | NA | non-coding | downstream | 30230 | 17121970 ~ 17122173 (-) |
| G579941 | NA | non-coding | upstream | 6504 | 17159558 ~ 17160509 (-) |
| G580011 | NA | non-coding | upstream | 30823 | 17183877 ~ 17184585 (-) |
| G580094 | NA | non-coding | upstream | 136720 | 17289774 ~ 17290458 (-) |
| G580099 | NA | non-coding | upstream | 143804 | 17296858 ~ 17297099 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 351717 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 591258 | 16559930 ~ 16635251 (-) |
| G579278 | NA | other | downstream | 686869 | 16464942 ~ 16465534 (-) |
| LOC110528887 | LOC106574501 | other | downstream | 831639 | 16316980 ~ 16320794 (-) |
| G579125 | LOC106574487 | other | downstream | 1022086 | 16129493 ~ 16130317 (-) |
| G580487 | NA | other | upstream | 244803 | 17397857 ~ 17400536 (-) |
| G581089 | LOC106575297 | other | upstream | 889873 | 18042927 ~ 18043380 (-) |
| G581174 | LOC101077481 | other | upstream | 1064104 | 18217158 ~ 18235038 (-) |
| G583661 | NA | other | upstream | 3062595 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 3619813 | 20772867 ~ 20778065 (-) |
