Gene
RNA
| Item | Value |
|---|---|
| gene id | G580212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17431098 ~ 17431336 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU662078 | True | 239 | lncRNA | 0.36 | 1 | 17431098 | 17431336 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527410 | LOC106575311 | coding | upstream | 33080 | 17372378 ~ 17398018 (+) |
| si:ch211-181l5.2 | cl10a | coding | upstream | 94679 | 17333699 ~ 17336419 (+) |
| LOC110527408 | LOC106574552 | coding | upstream | 99261 | 17328880 ~ 17331837 (+) |
| LOC118965348 | LOC106574556 | coding | upstream | 104747 | 17322665 ~ 17326351 (+) |
| LOC110528799 | LOC106575315 | coding | upstream | 170803 | 17216928 ~ 17260295 (+) |
| LOC100136600 | LOC106574550 | coding | downstream | 37011 | 17468347 ~ 17473938 (+) |
| abcb11b | LOC106575306 | coding | downstream | 53039 | 17484375 ~ 17496205 (+) |
| LOC100136260 | LOC100195750 | coding | downstream | 82900 | 17514236 ~ 17518488 (+) |
| LOC110527418 | LOC106575302 | coding | downstream | 295554 | 17726890 ~ 17750107 (+) |
| LOC110528802 | LOC106574564 | coding | downstream | 460619 | 17891955 ~ 17929312 (+) |
| G580202 | NA | non-coding | upstream | 4090 | 17412867 ~ 17427008 (+) |
| G580196 | NA | non-coding | upstream | 25701 | 17404840 ~ 17405397 (+) |
| G580194 | NA | non-coding | upstream | 28173 | 17402669 ~ 17402925 (+) |
| G580192 | NA | non-coding | upstream | 29282 | 17401555 ~ 17401816 (+) |
| G580190 | NA | non-coding | upstream | 36788 | 17393903 ~ 17394310 (+) |
| G580246 | NA | non-coding | downstream | 98068 | 17529404 ~ 17529612 (+) |
| G580250 | NA | non-coding | downstream | 108277 | 17539613 ~ 17539860 (+) |
| G580253 | NA | non-coding | downstream | 111656 | 17542992 ~ 17543733 (+) |
| G580254 | NA | non-coding | downstream | 112893 | 17544229 ~ 17544434 (+) |
| G580259 | NA | non-coding | downstream | 118996 | 17550332 ~ 17550888 (+) |
| G580179 | NA | other | upstream | 30565 | 17398793 ~ 17400533 (+) |
| LOC110527403 | LOC106574539 | other | upstream | 333174 | 17042409 ~ 17097924 (+) |
| G579566 | NA | other | upstream | 611208 | 16818542 ~ 16819890 (+) |
| LOC110528786 | omp-1 | other | upstream | 967406 | 16457220 ~ 16463699 (+) |
| G580315 | LOC106575303 | other | downstream | 238939 | 17670275 ~ 17680668 (+) |
| G580365 | NA | other | downstream | 382006 | 17813342 ~ 17816848 (+) |
| G580997 | NA | other | downstream | 1060891 | 18492227 ~ 18492909 (+) |
| G581976 | LOC106581475 | other | downstream | 1545342 | 18976678 ~ 18976999 (+) |
| LOC110528807 | LOC106574429 | other | downstream | 2586519 | 20017855 ~ 20028775 (+) |
