G580524


Basic Information

Item Value
gene id G580524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 17505794 ~ 17506305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU662422
agtaggacagagacagtataggactagcagggcagagacagtataggactagtaggagagagacagtataggactagtaggacagacaCAGAATAGGACTAGtatgacagagacagtataggactagcagggcagagacagtataggactagtaggagagagacagtataggactagtaggacagagacagtataggactagtagacAGAGCCAGTATAgaactagtaggacagagacagtatagggcTAGTAgggcagagacagtataggactagtaggagagagacagtataggactagtaggacagagacagtataggactagtaggacagagacagtataggactagtaggacagagacagtacaggactagtaggacagagacagtacaggactagtaggacagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU662422 True 412 lncRNA 0.46 2 17505794 17506305

Neighbor

gene id symbol gene type direction distance location
LOC110527417 LOC106575307 coding downstream 23826 17474265 ~ 17481968 (-)
LOC110527413 LOC106575308 coding downstream 43582 17431894 ~ 17462212 (-)
LOC110527414 LOC106574549 coding downstream 75706 17426540 ~ 17430088 (-)
LOC110527411 LOC106574553 coding downstream 80783 17406916 ~ 17425011 (-)
LOC110527416 LOC106575305 coding upstream 30013 17536258 ~ 17662496 (-)
LOC110528801 LOC106575303 coding upstream 159208 17665513 ~ 17714934 (-)
LOC110527420 LOC106575301 coding upstream 249021 17755326 ~ 17803651 (-)
LOC110527099 LOC106575332 coding upstream 317221 17823526 ~ 17827349 (-)
LOC110527421 NA coding upstream 428489 17934794 ~ 17940045 (-)
G580523 NA non-coding downstream 1257 17496727 ~ 17504537 (-)
G580521 NA non-coding downstream 39330 17466120 ~ 17466464 (-)
G580520 NA non-coding downstream 39960 17465589 ~ 17465834 (-)
G580485 NA non-coding downstream 111608 17393955 ~ 17394186 (-)
G580471 NA non-coding downstream 128620 17376930 ~ 17377174 (-)
G580475 NA non-coding upstream 8070 17514375 ~ 17518475 (-)
G580526 NA non-coding upstream 17722 17524027 ~ 17524257 (-)
G580527 LOC100194703 non-coding upstream 19960 17526265 ~ 17526528 (-)
G580528 LOC100194703 non-coding upstream 20284 17526589 ~ 17526814 (-)
G580536 NA non-coding upstream 28893 17535198 ~ 17535418 (-)
G580487 NA other downstream 105258 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 705108 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 944649 16559930 ~ 16635251 (-)
G579278 NA other downstream 1040260 16464942 ~ 16465534 (-)
LOC110528887 LOC106574501 other downstream 1185030 16316980 ~ 16320794 (-)
G581089 LOC106575297 other upstream 536622 18042927 ~ 18043380 (-)
G581174 LOC101077481 other upstream 710853 18217158 ~ 18235038 (-)
G583661 NA other upstream 2709344 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 3266562 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 3332183 20838415 ~ 20839399 (-)

Expression


Co-expression Network