Gene
RNA
| Item | Value |
|---|---|
| gene id | G580540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17546694 ~ 17546937 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU662438 | True | 244 | lncRNA | 0.30 | 1 | 17546694 | 17546937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527417 | LOC106575307 | coding | downstream | 64726 | 17474265 ~ 17481968 (-) |
| LOC110527413 | LOC106575308 | coding | downstream | 84482 | 17431894 ~ 17462212 (-) |
| LOC110527414 | LOC106574549 | coding | downstream | 116606 | 17426540 ~ 17430088 (-) |
| LOC110527411 | LOC106574553 | coding | downstream | 121683 | 17406916 ~ 17425011 (-) |
| LOC110528801 | LOC106575303 | coding | upstream | 118576 | 17665513 ~ 17714934 (-) |
| LOC110527420 | LOC106575301 | coding | upstream | 208389 | 17755326 ~ 17803651 (-) |
| LOC110527099 | LOC106575332 | coding | upstream | 276589 | 17823526 ~ 17827349 (-) |
| LOC110527421 | NA | coding | upstream | 387857 | 17934794 ~ 17940045 (-) |
| LOC110527423 | gran | coding | upstream | 533054 | 18079991 ~ 18090271 (-) |
| G580539 | NA | non-coding | downstream | 998 | 17545492 ~ 17545696 (-) |
| LOC110527416 | LOC106575305 | non-coding | downstream | 9896 | 17536258 ~ 17662496 (-) |
| G580537 | NA | non-coding | downstream | 11019 | 17535429 ~ 17535675 (-) |
| G580536 | NA | non-coding | downstream | 11276 | 17535198 ~ 17535418 (-) |
| G580528 | LOC100194703 | non-coding | downstream | 19880 | 17526589 ~ 17526814 (-) |
| G580545 | NA | non-coding | upstream | 19154 | 17566091 ~ 17566509 (-) |
| G580549 | NA | non-coding | upstream | 23192 | 17570129 ~ 17570373 (-) |
| G580568 | NA | non-coding | upstream | 42422 | 17589359 ~ 17589640 (-) |
| G580572 | NA | non-coding | upstream | 46323 | 17593260 ~ 17593717 (-) |
| G580573 | NA | non-coding | upstream | 47604 | 17594541 ~ 17594826 (-) |
| G580487 | NA | other | downstream | 146158 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 746008 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 985549 | 16559930 ~ 16635251 (-) |
| G579278 | NA | other | downstream | 1081160 | 16464942 ~ 16465534 (-) |
| LOC110528887 | LOC106574501 | other | downstream | 1225930 | 16316980 ~ 16320794 (-) |
| G581089 | LOC106575297 | other | upstream | 495990 | 18042927 ~ 18043380 (-) |
| G581174 | LOC101077481 | other | upstream | 670221 | 18217158 ~ 18235038 (-) |
| G583661 | NA | other | upstream | 2668712 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 3225930 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 3291551 | 20838415 ~ 20839399 (-) |
