Gene
RNA
| Item | Value |
|---|---|
| gene id | G580588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17619362 ~ 17619597 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU662488 | True | 236 | lncRNA | 0.43 | 1 | 17619362 | 17619597 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527417 | LOC106575307 | coding | downstream | 137394 | 17474265 ~ 17481968 (-) |
| LOC110527413 | LOC106575308 | coding | downstream | 157150 | 17431894 ~ 17462212 (-) |
| LOC110527414 | LOC106574549 | coding | downstream | 189274 | 17426540 ~ 17430088 (-) |
| LOC110527411 | LOC106574553 | coding | downstream | 194351 | 17406916 ~ 17425011 (-) |
| LOC110528801 | LOC106575303 | coding | upstream | 45916 | 17665513 ~ 17714934 (-) |
| LOC110527420 | LOC106575301 | coding | upstream | 135729 | 17755326 ~ 17803651 (-) |
| LOC110527099 | LOC106575332 | coding | upstream | 203929 | 17823526 ~ 17827349 (-) |
| LOC110527421 | NA | coding | upstream | 315197 | 17934794 ~ 17940045 (-) |
| LOC110527423 | gran | coding | upstream | 460394 | 18079991 ~ 18090271 (-) |
| G580586 | NA | non-coding | downstream | 2453 | 17616580 ~ 17616909 (-) |
| G580575 | NA | non-coding | downstream | 19295 | 17599790 ~ 17600067 (-) |
| G580573 | NA | non-coding | downstream | 24536 | 17594541 ~ 17594826 (-) |
| G580572 | NA | non-coding | downstream | 25645 | 17593260 ~ 17593717 (-) |
| G580568 | NA | non-coding | downstream | 29722 | 17589359 ~ 17589640 (-) |
| G580601 | NA | non-coding | upstream | 13650 | 17633247 ~ 17633480 (-) |
| G580611 | NA | non-coding | upstream | 22042 | 17641639 ~ 17641860 (-) |
| G580614 | NA | non-coding | upstream | 24381 | 17643978 ~ 17644181 (-) |
| G580618 | NA | non-coding | upstream | 26375 | 17645972 ~ 17646181 (-) |
| G580619 | NA | non-coding | upstream | 26922 | 17646519 ~ 17646726 (-) |
| G580487 | NA | other | downstream | 218826 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 818676 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 1058217 | 16559930 ~ 16635251 (-) |
| G579278 | NA | other | downstream | 1153828 | 16464942 ~ 16465534 (-) |
| LOC110528887 | LOC106574501 | other | downstream | 1298598 | 16316980 ~ 16320794 (-) |
| G581089 | LOC106575297 | other | upstream | 423330 | 18042927 ~ 18043380 (-) |
| G581174 | LOC101077481 | other | upstream | 597561 | 18217158 ~ 18235038 (-) |
| G583661 | NA | other | upstream | 2596052 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 3153270 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 3218891 | 20838415 ~ 20839399 (-) |
