Gene
RNA
| Item | Value |
|---|---|
| gene id | G581057 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 17995157 ~ 17995361 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU663030 | True | 205 | lncRNA | 0.54 | 1 | 17995157 | 17995361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527421 | NA | coding | downstream | 55112 | 17934794 ~ 17940045 (-) |
| LOC110527099 | LOC106575332 | coding | downstream | 167808 | 17823526 ~ 17827349 (-) |
| LOC110527420 | LOC106575301 | coding | downstream | 191506 | 17755326 ~ 17803651 (-) |
| LOC110528801 | LOC106575303 | coding | downstream | 280223 | 17665513 ~ 17714934 (-) |
| LOC110527416 | LOC106575305 | coding | downstream | 332661 | 17536258 ~ 17662496 (-) |
| LOC110527423 | gran | coding | upstream | 84630 | 18079991 ~ 18090271 (-) |
| LOC110527425 | LOC106575295 | coding | upstream | 128587 | 18123948 ~ 18164002 (-) |
| LOC110527428 | LOC106575293 | coding | upstream | 178193 | 18173554 ~ 18176952 (-) |
| LOC110527429 | psde | coding | upstream | 183094 | 18178455 ~ 18193482 (-) |
| LOC110528804 | mospd2 | coding | upstream | 198663 | 18194024 ~ 18199581 (-) |
| G581050 | NA | non-coding | downstream | 12570 | 17982310 ~ 17982587 (-) |
| G581049 | NA | non-coding | downstream | 13133 | 17981781 ~ 17982024 (-) |
| G580741 | NA | non-coding | downstream | 62897 | 17932054 ~ 17932260 (-) |
| G580738 | NA | non-coding | downstream | 65884 | 17927378 ~ 17929273 (-) |
| G580737 | NA | non-coding | downstream | 67920 | 17925749 ~ 17927237 (-) |
| G581061 | NA | non-coding | upstream | 6710 | 18002071 ~ 18002275 (-) |
| G581064 | NA | non-coding | upstream | 8918 | 18004279 ~ 18004874 (-) |
| G581075 | NA | non-coding | upstream | 24238 | 18019599 ~ 18019959 (-) |
| G581087 | NA | non-coding | upstream | 44783 | 18040144 ~ 18040489 (-) |
| G581090 | NA | non-coding | upstream | 48571 | 18043932 ~ 18044299 (-) |
| G580487 | NA | other | downstream | 594621 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 1194471 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 1434012 | 16559930 ~ 16635251 (-) |
| G579278 | NA | other | downstream | 1529623 | 16464942 ~ 16465534 (-) |
| LOC110528887 | LOC106574501 | other | downstream | 1674393 | 16316980 ~ 16320794 (-) |
| G581089 | LOC106575297 | other | upstream | 47566 | 18042927 ~ 18043380 (-) |
| G581174 | LOC101077481 | other | upstream | 221797 | 18217158 ~ 18235038 (-) |
| G583661 | NA | other | upstream | 2220288 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 2777506 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 2843127 | 20838415 ~ 20839399 (-) |
