G581064


Basic Information

Item Value
gene id G581064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18004279 ~ 18004874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663038
TAGTAACAGTACAAGTCCCTCGTTCCCTCGAACACTCTCCCACGTTGTCCTCTCTTTCTTCACCATTATACCTCCGTCATCCATCTCTCCAGTACGGtcctccaccctacctgtccacatccccctatccacatgcAGGGTTCTCGCCAGGATTTCTTTAACAAGGTGAAAATGTCCCGTCAGCACACAGCAAACCATGTTTCATGACCAGTCACCAACTTTAACCCGGCTTCAACCAGCTCTTATGAAACCGTTCAGCCCTTGTAGGTGGAAATGACAGCAAGGCAAGTGATTACATACACCTTGACCATGACGCAACCGCTACAAGCTTAGTCATCTGGATAGGAAGGAATATCATCGTTAGAGGGCATCCGCATGCACCCTGGGTGACCCTGGTTATTGGATATGGGAGAGGTGGTTTAAACTTTCACTCTGCCCCTCGCTAAGCATGTGACCTGTCGAAACAATAGCAGCTGTCATGCCAACTCATAATCTCCATGGAAAATTCAGAAGCGGCTTAAACTAAACGACTCATTCAATTATATGTCACCTTTTTATGTATTAAAATGTTCAATTTTGTATACAGTGACTGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663038 True 596 lncRNA 0.46 1 18004279 18004874

Neighbor

gene id symbol gene type direction distance location
LOC110527421 NA coding downstream 64234 17934794 ~ 17940045 (-)
LOC110527099 LOC106575332 coding downstream 176930 17823526 ~ 17827349 (-)
LOC110527420 LOC106575301 coding downstream 200628 17755326 ~ 17803651 (-)
LOC110528801 LOC106575303 coding downstream 289345 17665513 ~ 17714934 (-)
LOC110527416 LOC106575305 coding downstream 341783 17536258 ~ 17662496 (-)
LOC110527423 gran coding upstream 75117 18079991 ~ 18090271 (-)
LOC110527425 LOC106575295 coding upstream 119074 18123948 ~ 18164002 (-)
LOC110527428 LOC106575293 coding upstream 168680 18173554 ~ 18176952 (-)
LOC110527429 psde coding upstream 173581 18178455 ~ 18193482 (-)
LOC110528804 mospd2 coding upstream 189150 18194024 ~ 18199581 (-)
G581061 NA non-coding downstream 2004 18002071 ~ 18002275 (-)
G581057 NA non-coding downstream 8918 17995157 ~ 17995361 (-)
G581050 NA non-coding downstream 21692 17982310 ~ 17982587 (-)
G581049 NA non-coding downstream 22255 17981781 ~ 17982024 (-)
G580741 NA non-coding downstream 72019 17932054 ~ 17932260 (-)
G581075 NA non-coding upstream 14725 18019599 ~ 18019959 (-)
G581087 NA non-coding upstream 35270 18040144 ~ 18040489 (-)
G581090 NA non-coding upstream 39058 18043932 ~ 18044299 (-)
G581091 NA non-coding upstream 39606 18044480 ~ 18044687 (-)
G581092 NA non-coding upstream 42202 18047076 ~ 18099036 (-)
G580487 NA other downstream 603743 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1203593 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1443134 16559930 ~ 16635251 (-)
G579278 NA other downstream 1538745 16464942 ~ 16465534 (-)
LOC110528887 LOC106574501 other downstream 1683515 16316980 ~ 16320794 (-)
G581089 LOC106575297 other upstream 38053 18042927 ~ 18043380 (-)
G581174 LOC101077481 other upstream 212284 18217158 ~ 18235038 (-)
G583661 NA other upstream 2210775 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2767993 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2833614 20838415 ~ 20839399 (-)

Expression


Co-expression Network