XLOC_025210 (BX901973.1)


Basic Information

Item Value
gene id XLOC_025210
gene name BX901973.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 17855981 ~ 17879354 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049785
AGACAGGAGAAGGATACTATTTGGGAAGTCATTTCTGTGACTGATCAAACATTGATAATGCAACCTTTCATGcatctgacTCAAAAAGCCATGGTTCAGCCGCAAAagaaaacattttacaatttaaaaaaaaaaaaaacgaaagtaaAAGGAAGCTGTCAGTCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116223

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049785 True 165 mRNA 0.35 8 17855981 17879354

Neighbor

gene id symbol gene type direction distance location
XLOC_025208 dhx58 coding upstream 145760 17689419 ~ 17710221 (+)
XLOC_025207 kat2a coding upstream 175867 17653784 ~ 17680114 (+)
XLOC_025206 rab5c coding upstream 204082 17615599 ~ 17651899 (+)
XLOC_025205 kcnh4a coding upstream 251872 17547532 ~ 17604109 (+)
XLOC_025204 hcrt coding upstream 314533 17537352 ~ 17541448 (+)
XLOC_025212 ttc25 coding downstream 31215 17910569 ~ 17928233 (+)
XLOC_025213 cnp coding downstream 53778 17933132 ~ 17946949 (+)
XLOC_025214 aclya coding downstream 72436 17951790 ~ 18009316 (+)
XLOC_025215 NA coding downstream 161259 18040613 ~ 18061783 (+)
XLOC_025216 ankrd40 coding downstream 183517 18062871 ~ 18080924 (+)
XLOC_025429 BX649540.1 misc downstream 12369385 30248739 ~ 30249036 (+)
XLOC_025203 CU207238.1 non-coding upstream 394096 17395239 ~ 17461885 (+)
XLOC_025197 BX470185.1 non-coding upstream 972677 16874401 ~ 16883304 (+)
XLOC_025188 CR388224.1 non-coding upstream 1482854 16373012 ~ 16373127 (+)
XLOC_025185 NA non-coding upstream 1614641 16186593 ~ 16241340 (+)
XLOC_025184 NA non-coding upstream 1694522 16153224 ~ 16161459 (+)
XLOC_025218 NA non-coding downstream 310255 18189609 ~ 18197126 (+)
XLOC_025227 NA non-coding downstream 791470 18670824 ~ 18672291 (+)
XLOC_025229 AL772362.2 non-coding downstream 892174 18771528 ~ 18788485 (+)
XLOC_025233 AL772362.1 non-coding downstream 988481 18867835 ~ 18867952 (+)

Expression


Co-expression Network