G581092


Basic Information

Item Value
gene id G581092
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18047076 ~ 18099036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663068
cttttatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccatgtcagctcaggggtttgaacttgcaaccttccggttactagtccaactagtccaacactctaaccactaggctaccctgccgccctgatgaggattttttaaaatgtaatccattttaaaataaggctgtaacgtaacaaaatgtggaaaaagggaaggggtctgaatattttccgaatgcactgtaaatgcgTCCCTATGAATAATTTGcagtaaacaatacattttaTGGCCCTCTTCAGTTCCTCTATTTGTTGAGTACTGGTGACCATTTCCTGCACTAGTCCCATGAATAAAATTAAACTCCCTATTTTCTCTACACTGCATATGTAATTCTCAAAGTCAAAGGGATATTGAAGATGTGTGTATAGTACACATTTGCAGATAAGAACAGTTGAAAGAGGCTTACGAGTCTGCCAAATCATAGAGAGAATATGAAGCTGTGAAGGAGTGTCTCCATATCTGTTGAAATAAATTAAGCAAATTATAATTAGGAATCATTAGATCAATTACTTATATGCATTAATTAATACATTAATTCAATTAGATGTATTtctttttaaactttatttatcCCTGCAGGGCAATTACTTTGAGCACATAAGTCTGATTCtgcaacaacaaccacaccacaatGACATGCCACACATAGCTACTTCACAGCAGGATAGCACAACAGCAACAAATCATTAAATAGCACAATACATTACCTTAGTCCAATTGCTCTTGAAAGCAACATATCTTTTATCAGCAGACACTACATAATCAGAGGCAGCCACTTGATCCTATTTTCAACAAAAAAAGGAGCTGTGTTATACCTGACAAAAACACTCCTTCCTTCACCATGCagacagacagacagacagacagacagacaggcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663068 True 992 lncRNA 0.38 2 18047076 18099036

Neighbor

gene id symbol gene type direction distance location
LOC110527421 NA coding downstream 107031 17934794 ~ 17940045 (-)
LOC110527099 LOC106575332 coding downstream 219727 17823526 ~ 17827349 (-)
LOC110527420 LOC106575301 coding downstream 243425 17755326 ~ 17803651 (-)
LOC110528801 LOC106575303 coding downstream 332142 17665513 ~ 17714934 (-)
LOC110527416 LOC106575305 coding downstream 384580 17536258 ~ 17662496 (-)
LOC110527425 LOC106575295 coding upstream 24912 18123948 ~ 18164002 (-)
LOC110527428 LOC106575293 coding upstream 74518 18173554 ~ 18176952 (-)
LOC110527429 psde coding upstream 79419 18178455 ~ 18193482 (-)
LOC110528804 mospd2 coding upstream 94988 18194024 ~ 18199581 (-)
LOC110527433 LOC106575287 coding upstream 146951 18245987 ~ 18256261 (-)
G581091 NA non-coding downstream 2389 18044480 ~ 18044687 (-)
G581090 NA non-coding downstream 2777 18043932 ~ 18044299 (-)
G581087 NA non-coding downstream 6587 18040144 ~ 18040489 (-)
G581075 NA non-coding downstream 27117 18019599 ~ 18019959 (-)
G581064 NA non-coding downstream 42202 18004279 ~ 18004874 (-)
G581118 NA non-coding upstream 200 18099236 ~ 18101432 (-)
G581124 NA non-coding upstream 8558 18107594 ~ 18107869 (-)
G581125 NA non-coding upstream 8838 18107874 ~ 18108078 (-)
G581134 adcy10 non-coding upstream 19600 18118636 ~ 18118925 (-)
G581135 NA non-coding upstream 21210 18120246 ~ 18121038 (-)
G581089 LOC106575297 other downstream 3696 18042927 ~ 18043380 (-)
G580487 NA other downstream 646540 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1246390 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1485931 16559930 ~ 16635251 (-)
G579278 NA other downstream 1581542 16464942 ~ 16465534 (-)
G581174 LOC101077481 other upstream 118122 18217158 ~ 18235038 (-)
G583661 NA other upstream 2116613 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2673831 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2739452 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 3322418 21421454 ~ 21424585 (-)

Expression


Co-expression Network