Gene
RNA
| Item | Value |
|---|---|
| gene id | G580899 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 18201110 ~ 18201622 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: motile sperm domain-containing protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU662849 | True | 513 | lncRNA | 0.42 | 1 | 18201110 | 18201622 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528803 | adcy10 | coding | upstream | 76795 | 18111715 ~ 18127563 (+) |
| gcg2 | gcg2 | coding | upstream | 89459 | 18108790 ~ 18111651 (+) |
| LOC110527424 | LOC106575296 | coding | upstream | 93874 | 18096457 ~ 18107236 (+) |
| LOC110527422 | LOC106575297 | coding | upstream | 121111 | 18002333 ~ 18079999 (+) |
| LOC110528802 | LOC106574564 | coding | upstream | 271798 | 17891955 ~ 17929312 (+) |
| LOC110527430 | gemin8 | coding | downstream | 1029 | 18202651 ~ 18204833 (+) |
| LOC110527431 | LOC106575289 | coding | downstream | 3679 | 18205301 ~ 18242163 (+) |
| LOC110527437 | LOC106575282 | coding | downstream | 203132 | 18404754 ~ 18495689 (+) |
| LOC110527438 | LOC106575281 | coding | downstream | 321981 | 18523603 ~ 18581511 (+) |
| LOC110527442 | LOC106575278 | coding | downstream | 981761 | 19183383 ~ 19192955 (+) |
| G580897 | NA | non-coding | upstream | 4507 | 18196379 ~ 18196603 (+) |
| G580896 | NA | non-coding | upstream | 5203 | 18194710 ~ 18195907 (+) |
| G580877 | NA | non-coding | upstream | 30824 | 18169854 ~ 18170286 (+) |
| G580851 | NA | non-coding | upstream | 77681 | 18123191 ~ 18123429 (+) |
| G580918 | NA | non-coding | downstream | 59062 | 18260684 ~ 18261454 (+) |
| G580784 | NA | non-coding | downstream | 95037 | 18296659 ~ 18299059 (+) |
| G580988 | NA | non-coding | downstream | 183087 | 18384709 ~ 18386365 (+) |
| G580994 | LOC106574410 | non-coding | downstream | 197350 | 18398972 ~ 18399995 (+) |
| G580995 | msl3 | non-coding | downstream | 198509 | 18400131 ~ 18401778 (+) |
| G580365 | NA | other | upstream | 384262 | 17813342 ~ 17816848 (+) |
| G580315 | LOC106575303 | other | upstream | 520442 | 17670275 ~ 17680668 (+) |
| G580179 | NA | other | upstream | 800577 | 17398793 ~ 17400533 (+) |
| si:ch211-181l5.2 | cl10a | other | upstream | 866981 | 17333699 ~ 17336419 (+) |
| LOC110527403 | LOC106574539 | other | upstream | 1103186 | 17042409 ~ 17097924 (+) |
| G580997 | NA | other | downstream | 290605 | 18492227 ~ 18492909 (+) |
| G581976 | LOC106581475 | other | downstream | 775056 | 18976678 ~ 18976999 (+) |
| LOC110528807 | LOC106574429 | other | downstream | 1816233 | 20017855 ~ 20028775 (+) |
| G583605 | NA | other | downstream | 2037289 | 20238911 ~ 20239797 (+) |
| G584643 | NA | other | downstream | 2879206 | 21080828 ~ 21082615 (+) |
