G581174 (LOC101077481)


Basic Information

Item Value
gene id G581174
gene name LOC101077481
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18217158 ~ 18235038 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663175
ccgacacacacaatacacaacttACACGATGGTGAGGGTGGCGTGGTCAGTGGTGATCTGAGAGAAGTGATTCTCCAGCATGGTCAGTGTGCCGGTCAGCGCCACGTGACCACACCCGCAGAACAGAGCCACGCCCGAGAAACAGAGGATGGTGGCCACCAGCGAGGCGTAGGGCACGCCGCCCAGACACTTGATGCAGCATTCGAAGCAAcTTTgctttcttccctctcctcttggTTTTCCTCTGTGGTAGACTCCATGACTGGCTTCGTCCCATCCATTTTGGAATCTTTTCCTTTGAATACTTTTTCTCCCTGTCTTTTGGATTCTGactttgctctctctttctctctccctccctccctccctccctcaccctctctcccttgcaAGCTTAGCTCCTCTGTATATACTAGGCTACAATCCCATTTCAAGATTCAAAGGTCTTGTCCGATTTTGCACAGATTAGTGGTCCCTAAACGATGCCAGCTAACGCTTTGGCTGTATGTCACTTGCAATCCCAATTCGGCGATGGATAAAAACGTTGATCACGGTAGATTTTTGAGCGCCCACCCTATTTTATAGTATAGAATGAACTCAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663175 True 602 TUCP 0.50 2 18217158 18235038

Neighbor

gene id symbol gene type direction distance location
LOC110528804 mospd2 coding downstream 17577 18194024 ~ 18199581 (-)
LOC110527429 psde coding downstream 23676 18178455 ~ 18193482 (-)
LOC110527428 LOC106575293 coding downstream 40206 18173554 ~ 18176952 (-)
LOC110527425 LOC106575295 coding downstream 53156 18123948 ~ 18164002 (-)
LOC110527423 gran coding downstream 126887 18079991 ~ 18090271 (-)
LOC110527433 LOC106575287 coding upstream 10949 18245987 ~ 18256261 (-)
LOC110527432 tceanc coding upstream 17199 18252237 ~ 18254010 (-)
LOC100170202 NA coding upstream 62480 18244368 ~ 18299083 (-)
LOC110527434 prps2 coding upstream 65353 18300391 ~ 18311994 (-)
LOC110528806 frmpd4 coding upstream 80378 18315416 ~ 18383323 (-)
G581136 NA non-coding downstream 94661 18121847 ~ 18122497 (-)
G581135 NA non-coding downstream 96120 18120246 ~ 18121038 (-)
G581134 adcy10 non-coding downstream 98233 18118636 ~ 18118925 (-)
G581125 NA non-coding downstream 109080 18107874 ~ 18108078 (-)
LOC110527435 LOC106574410 non-coding upstream 149674 18384671 ~ 18401796 (-)
G581257 NA non-coding upstream 152257 18387295 ~ 18388151 (-)
G581258 NA non-coding upstream 154878 18389916 ~ 18391076 (-)
G581291 NA non-coding upstream 218350 18453388 ~ 18453682 (-)
G581089 LOC106575297 other downstream 173778 18042927 ~ 18043380 (-)
G580487 NA other downstream 816622 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1416472 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1656013 16559930 ~ 16635251 (-)
G579278 NA other downstream 1751624 16464942 ~ 16465534 (-)
G583661 NA other upstream 1980611 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2537829 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2603450 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 3186416 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 3282357 21513832 ~ 21583054 (-)

Expression


Co-expression Network