Gene
RNA
| Item | Value |
|---|---|
| gene id | G580918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 18260684 ~ 18261454 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU662868 | False | 355 | lncRNA | 0.44 | 2 | 18260684 | 18261287 |
| TU662869 | True | 522 | lncRNA | 0.40 | 2 | 18260684 | 18261454 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527431 | LOC106575289 | coding | upstream | 18521 | 18205301 ~ 18242163 (+) |
| LOC110527430 | gemin8 | coding | upstream | 55851 | 18202651 ~ 18204833 (+) |
| LOC110528803 | adcy10 | coding | upstream | 136369 | 18111715 ~ 18127563 (+) |
| gcg2 | gcg2 | coding | upstream | 149033 | 18108790 ~ 18111651 (+) |
| LOC110527424 | LOC106575296 | coding | upstream | 153448 | 18096457 ~ 18107236 (+) |
| LOC110527437 | LOC106575282 | coding | downstream | 143300 | 18404754 ~ 18495689 (+) |
| LOC110527438 | LOC106575281 | coding | downstream | 262149 | 18523603 ~ 18581511 (+) |
| LOC110527442 | LOC106575278 | coding | downstream | 921929 | 19183383 ~ 19192955 (+) |
| LOC110527443 | LOC106575277 | coding | downstream | 1163911 | 19425365 ~ 19430875 (+) |
| LOC110527444 | LOC106575275 | coding | downstream | 1521391 | 19782845 ~ 19788004 (+) |
| G580899 | NA | non-coding | upstream | 59062 | 18201110 ~ 18201622 (+) |
| G580897 | NA | non-coding | upstream | 64081 | 18196379 ~ 18196603 (+) |
| G580896 | NA | non-coding | upstream | 64777 | 18194710 ~ 18195907 (+) |
| G580877 | NA | non-coding | upstream | 90398 | 18169854 ~ 18170286 (+) |
| G580784 | NA | non-coding | downstream | 35205 | 18296659 ~ 18299059 (+) |
| G580988 | NA | non-coding | downstream | 123255 | 18384709 ~ 18386365 (+) |
| G580994 | LOC106574410 | non-coding | downstream | 137518 | 18398972 ~ 18399995 (+) |
| G580995 | msl3 | non-coding | downstream | 138677 | 18400131 ~ 18401778 (+) |
| G581018 | NA | non-coding | downstream | 166802 | 18428256 ~ 18428581 (+) |
| G580365 | NA | other | upstream | 443836 | 17813342 ~ 17816848 (+) |
| G580315 | LOC106575303 | other | upstream | 580016 | 17670275 ~ 17680668 (+) |
| G580179 | NA | other | upstream | 860151 | 17398793 ~ 17400533 (+) |
| si:ch211-181l5.2 | cl10a | other | upstream | 926555 | 17333699 ~ 17336419 (+) |
| LOC110527403 | LOC106574539 | other | upstream | 1162760 | 17042409 ~ 17097924 (+) |
| G580997 | NA | other | downstream | 230773 | 18492227 ~ 18492909 (+) |
| G581976 | LOC106581475 | other | downstream | 715224 | 18976678 ~ 18976999 (+) |
| LOC110528807 | LOC106574429 | other | downstream | 1756401 | 20017855 ~ 20028775 (+) |
| G583605 | NA | other | downstream | 1977457 | 20238911 ~ 20239797 (+) |
| G584643 | NA | other | downstream | 2819374 | 21080828 ~ 21082615 (+) |
