G581031


Basic Information

Item Value
gene id G581031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18458636 ~ 18458870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663004
CAGAGATCCTTGAAAAAATAGAGAATAGAAAAGCAAATGGCTCGTTGGATCGTTTTACAAGTAATTggagtggggaagagagagagaggactggaggtTCCTGGGATTGCTGTCCAACTTGCCGAGTCAACTGACAAGAATCCaaactatttcctctctctctctctctttctttctttctttctttctattttctgtcacacacatactgtctccCGCTCCCTTTCTCTCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663004 True 235 lncRNA 0.43 1 18458636 18458870

Neighbor

gene id symbol gene type direction distance location
LOC110527431 LOC106575289 coding upstream 216473 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 253803 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 334321 18111715 ~ 18127563 (+)
gcg2 gcg2 coding upstream 346985 18108790 ~ 18111651 (+)
LOC110527424 LOC106575296 coding upstream 351400 18096457 ~ 18107236 (+)
LOC110527438 LOC106575281 coding downstream 64733 18523603 ~ 18581511 (+)
LOC110527442 LOC106575278 coding downstream 724513 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 966495 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 1323975 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 1423698 19882568 ~ 19915181 (+)
G581018 NA non-coding upstream 30055 18428256 ~ 18428581 (+)
G580995 msl3 non-coding upstream 56858 18400131 ~ 18401778 (+)
G580994 LOC106574410 non-coding upstream 58641 18398972 ~ 18399995 (+)
G580988 NA non-coding upstream 72271 18384709 ~ 18386365 (+)
G580784 NA non-coding upstream 159577 18296659 ~ 18299059 (+)
G581037 NA non-coding downstream 21413 18480283 ~ 18480548 (+)
LOC110527437 LOC106575282 non-coding downstream 35062 18404754 ~ 18495689 (+)
G581319 NA non-coding downstream 51048 18509918 ~ 18510234 (+)
G581493 NA non-coding downstream 183471 18642341 ~ 18642583 (+)
G581498 NA non-coding downstream 186777 18645647 ~ 18645847 (+)
G580365 NA other upstream 641788 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 777968 17670275 ~ 17680668 (+)
G580179 NA other upstream 1058103 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 1124507 17333699 ~ 17336419 (+)
LOC110527403 LOC106574539 other upstream 1360712 17042409 ~ 17097924 (+)
G580997 NA other downstream 33357 18492227 ~ 18492909 (+)
G581976 LOC106581475 other downstream 517808 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1558985 20017855 ~ 20028775 (+)
G583605 NA other downstream 1780041 20238911 ~ 20239797 (+)
G584643 NA other downstream 2621958 21080828 ~ 21082615 (+)

Expression


Co-expression Network