G581037


Basic Information

Item Value
gene id G581037
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18480283 ~ 18480548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663010
ACTGTAGTCTGTATCTCTCTCGGTTCCGGTTTGGAGACGCACTTGCTCTAAAGGTTGTGACTGTAGTTGATTTTAGTGTGCTCATTTTGAGTGGGCACACTAAAATAGTTTAGTTTCTCtcctagacagagagtgagaacagGCCTAGAGTAGTGCCAGCTCACACAGACGCCGTTAATTGAATTTACGAGACTGCCATGAGCCTGTTCTAAAAATGACTTGTAAGCAGGACTTTATTGTTCACTGGAATCAAAGACCACCTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663010 True 266 lncRNA 0.44 1 18480283 18480548

Neighbor

gene id symbol gene type direction distance location
LOC110527431 LOC106575289 coding upstream 238120 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 275450 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 355968 18111715 ~ 18127563 (+)
gcg2 gcg2 coding upstream 368632 18108790 ~ 18111651 (+)
LOC110527424 LOC106575296 coding upstream 373047 18096457 ~ 18107236 (+)
LOC110527438 LOC106575281 coding downstream 43055 18523603 ~ 18581511 (+)
LOC110527442 LOC106575278 coding downstream 702835 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 944817 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 1302297 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 1402020 19882568 ~ 19915181 (+)
G581031 NA non-coding upstream 21413 18458636 ~ 18458870 (+)
G581018 NA non-coding upstream 51702 18428256 ~ 18428581 (+)
G580995 msl3 non-coding upstream 78505 18400131 ~ 18401778 (+)
G580994 LOC106574410 non-coding upstream 80288 18398972 ~ 18399995 (+)
G580988 NA non-coding upstream 93918 18384709 ~ 18386365 (+)
LOC110527437 LOC106575282 non-coding downstream 13384 18404754 ~ 18495689 (+)
G581319 NA non-coding downstream 29370 18509918 ~ 18510234 (+)
G581493 NA non-coding downstream 161793 18642341 ~ 18642583 (+)
G581498 NA non-coding downstream 165099 18645647 ~ 18645847 (+)
G581503 NA non-coding downstream 169330 18649878 ~ 18650294 (+)
G580365 NA other upstream 663435 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 799615 17670275 ~ 17680668 (+)
G580179 NA other upstream 1079750 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 1146154 17333699 ~ 17336419 (+)
LOC110527403 LOC106574539 other upstream 1382359 17042409 ~ 17097924 (+)
G580997 NA other downstream 11679 18492227 ~ 18492909 (+)
G581976 LOC106581475 other downstream 496130 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1537307 20017855 ~ 20028775 (+)
G583605 NA other downstream 1758363 20238911 ~ 20239797 (+)
G584643 NA other downstream 2600280 21080828 ~ 21082615 (+)

Expression


Co-expression Network