Gene
RNA
| Item | Value |
|---|---|
| gene id | G581306 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 18488286 ~ 18488908 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rho GTPase-activating protein 6-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU663320 | True | 623 | lncRNA | 0.50 | 1 | 18488286 | 18488908 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527435 | LOC106574410 | coding | downstream | 86490 | 18384671 ~ 18401796 (-) |
| LOC110528806 | frmpd4 | coding | downstream | 104963 | 18315416 ~ 18383323 (-) |
| LOC110527434 | prps2 | coding | downstream | 176292 | 18300391 ~ 18311994 (-) |
| LOC100170202 | NA | coding | downstream | 190222 | 18244368 ~ 18299083 (-) |
| LOC110527432 | tceanc | coding | downstream | 234276 | 18252237 ~ 18254010 (-) |
| LOC110527440 | LOC106575280 | coding | upstream | 573921 | 19062829 ~ 19068838 (-) |
| LOC118965376 | NA | coding | upstream | 653238 | 19142146 ~ 19145574 (-) |
| LOC110527100 | NA | coding | upstream | 656849 | 19145757 ~ 19154599 (-) |
| LOC110527441 | NA | coding | upstream | 687127 | 19176035 ~ 19181090 (-) |
| LOC110527445 | nfip2 | coding | upstream | 1334723 | 19823631 ~ 19832571 (-) |
| G581295 | NA | non-coding | downstream | 31518 | 18456470 ~ 18456768 (-) |
| G581293 | NA | non-coding | downstream | 32953 | 18455041 ~ 18455333 (-) |
| G581291 | NA | non-coding | downstream | 34604 | 18453388 ~ 18453682 (-) |
| G581308 | NA | non-coding | upstream | 908 | 18489816 ~ 18490468 (-) |
| G581309 | NA | non-coding | upstream | 6073 | 18494981 ~ 18495687 (-) |
| G581314 | NA | non-coding | upstream | 14074 | 18502982 ~ 18503188 (-) |
| G581394 | NA | non-coding | upstream | 27908 | 18516816 ~ 18517037 (-) |
| G581415 | NA | non-coding | upstream | 57518 | 18546426 ~ 18549059 (-) |
| G581174 | LOC101077481 | other | downstream | 253248 | 18217158 ~ 18235038 (-) |
| G581089 | LOC106575297 | other | downstream | 444906 | 18042927 ~ 18043380 (-) |
| G580487 | NA | other | downstream | 1087750 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 1687600 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 1927141 | 16559930 ~ 16635251 (-) |
| G583661 | NA | other | upstream | 1726741 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 2283959 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 2349580 | 20838415 ~ 20839399 (-) |
| G585240 | LOC106575179 | other | upstream | 2932546 | 21421454 ~ 21424585 (-) |
| LOC110527499 | LOC106575189 | other | upstream | 3028487 | 21513832 ~ 21583054 (-) |
