G580997


Basic Information

Item Value
gene id G580997
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18492227 ~ 18492909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU662969
TGaaaattatgatgatgatgatgacgatgatgattgtggtggaggtgatgatgatgatcttaatgatgatgatgataatgattaccttaatgatgatgatggtaatgattgtggtgatgatgattatcttaatgatgatgatgattatctTAATGATGACGATGACCATGatctttttttttgtatttatttttgaatttgacgccctttttctccccaatttcatggtatccaattattagtatttactatcttgtctcatcgctacaactcccgtacgggctcgggagagacgaaggtcgaaagtcatgcgtcctctgaaacataaCCCAACCAAGCCAACCAAGCCGCATCTTAACACAGCGCcctccaacctggaagccagccgcaccaatgtgtcggaggaaacaacgtgcacctggcgacactggttagcgtgcactgcacccggcccgccacaggagtcgctggtgcgcgatgagacaagtatatccctactggccaaacaCACCCTAACcgggacaacgctaggccaattgtgcgtcgccccacggacctcccagtcgcggccggccagagtctctggtggcacagctagcactgcgatgcagtgccatagaccactgcgccacctgggaggcggTGATGATAatcttaatgatgatgatgatgatgattgtggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU662969 True 683 TUCP 0.48 1 18492227 18492909

Neighbor

gene id symbol gene type direction distance location
LOC110527431 LOC106575289 coding upstream 250064 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 287394 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 367912 18111715 ~ 18127563 (+)
gcg2 gcg2 coding upstream 380576 18108790 ~ 18111651 (+)
LOC110527424 LOC106575296 coding upstream 384991 18096457 ~ 18107236 (+)
LOC110527438 LOC106575281 coding downstream 30694 18523603 ~ 18581511 (+)
LOC110527442 LOC106575278 coding downstream 690474 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 932456 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 1289936 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 1389659 19882568 ~ 19915181 (+)
G581037 NA non-coding upstream 11679 18480283 ~ 18480548 (+)
G581031 NA non-coding upstream 33357 18458636 ~ 18458870 (+)
G581018 NA non-coding upstream 63646 18428256 ~ 18428581 (+)
G580995 msl3 non-coding upstream 90449 18400131 ~ 18401778 (+)
G580994 LOC106574410 non-coding upstream 92232 18398972 ~ 18399995 (+)
LOC110527437 LOC106575282 non-coding downstream 1023 18404754 ~ 18495689 (+)
G581319 NA non-coding downstream 17009 18509918 ~ 18510234 (+)
G581493 NA non-coding downstream 149432 18642341 ~ 18642583 (+)
G581498 NA non-coding downstream 152738 18645647 ~ 18645847 (+)
G581503 NA non-coding downstream 156969 18649878 ~ 18650294 (+)
G580365 NA other upstream 675379 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 811559 17670275 ~ 17680668 (+)
G580179 NA other upstream 1091694 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 1158098 17333699 ~ 17336419 (+)
LOC110527403 LOC106574539 other upstream 1394303 17042409 ~ 17097924 (+)
G581976 LOC106581475 other downstream 483769 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1524946 20017855 ~ 20028775 (+)
G583605 NA other downstream 1746002 20238911 ~ 20239797 (+)
G584643 NA other downstream 2587919 21080828 ~ 21082615 (+)
G585573 NA other downstream 3460120 21953029 ~ 21953269 (+)

Expression


Co-expression Network