G581415



Basic Information


Item Value
gene id G581415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18546426 ~ 18549059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU663434
aatttgtcatgtactgtcatgttgtgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttaggttaccttttctcccccgctttcccccagctgttccttgtctcctctgactacccattcaccccgtttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgttcctgtccttgtcggattcttgtttgtgtttcatgcctgagccagactatcgtcatgtttgctgtaaccttgtcctgtcctgtcggaatctgccggtctatctgagcctacctatgtttggttattaaagaagctctgtttaagttagttcgcttttgggtcctcattcactcaccataacaaaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU663434 True 389 lncRNA 0.47 2 18546426 18549059

Neighbor


gene id symbol gene type direction distance location
LOC110527435 LOC106574410 coding downstream 144630 18384671 ~ 18401796 (-)
LOC110528806 frmpd4 coding downstream 163103 18315416 ~ 18383323 (-)
LOC110527434 prps2 coding downstream 234432 18300391 ~ 18311994 (-)
LOC100170202 NA coding downstream 248362 18244368 ~ 18299083 (-)
LOC110527432 tceanc coding downstream 292416 18252237 ~ 18254010 (-)
LOC110527440 LOC106575280 coding upstream 513770 19062829 ~ 19068838 (-)
LOC118965376 NA coding upstream 593087 19142146 ~ 19145574 (-)
LOC110527100 NA coding upstream 596698 19145757 ~ 19154599 (-)
LOC110527441 NA coding upstream 626976 19176035 ~ 19181090 (-)
LOC110527445 nfip2 coding upstream 1274572 19823631 ~ 19832571 (-)
G581394 NA non-coding downstream 29389 18516816 ~ 18517037 (-)
G581314 NA non-coding downstream 43238 18502982 ~ 18503188 (-)
G581309 NA non-coding downstream 50739 18494981 ~ 18495687 (-)
G581308 NA non-coding downstream 55958 18489816 ~ 18490468 (-)
G581306 NA non-coding downstream 57518 18488286 ~ 18488908 (-)
G581431 LOC106574413 non-coding upstream 26772 18575831 ~ 18579354 (-)
G581497 NA non-coding upstream 96340 18645399 ~ 18645613 (-)
G581513 NA non-coding upstream 109011 18658070 ~ 18658298 (-)
G581526 NA non-coding upstream 118029 18667088 ~ 18667431 (-)
G581544 NA non-coding upstream 132732 18681791 ~ 18682005 (-)
G581174 LOC101077481 other downstream 311388 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 503046 18042927 ~ 18043380 (-)
G580487 NA other downstream 1145890 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1745740 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1985281 16559930 ~ 16635251 (-)
G583661 NA other upstream 1666590 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2223808 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2289429 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 2872395 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 2968336 21513832 ~ 21583054 (-)

Expression



Co-expression Network