G581498


Basic Information

Item Value
gene id G581498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18645647 ~ 18645847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663523
tgaacactactgaaatacaaaaacaataaactaaTACGTGAAAAtaccaaaccgaaacagtactgtgtggcgacaaacacagacacagaaacaaatacccacaaaacaacattgaaacccaggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgattgagaaccatactaggccgaacacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663523 True 201 lncRNA 0.40 1 18645647 18645847

Neighbor

gene id symbol gene type direction distance location
LOC110527438 LOC106575281 coding upstream 64136 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 149958 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 403484 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 440814 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 521332 18111715 ~ 18127563 (+)
LOC110527442 LOC106575278 coding downstream 537536 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 779518 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 1136998 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 1236721 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 1271598 19917445 ~ 19958310 (+)
G581493 NA non-coding upstream 3064 18642341 ~ 18642583 (+)
G581319 NA non-coding upstream 135413 18509918 ~ 18510234 (+)
G581037 NA non-coding upstream 165099 18480283 ~ 18480548 (+)
G581031 NA non-coding upstream 186777 18458636 ~ 18458870 (+)
G581503 NA non-coding downstream 4031 18649878 ~ 18650294 (+)
G581514 NA non-coding downstream 12564 18658411 ~ 18658738 (+)
G581515 NA non-coding downstream 13736 18659583 ~ 18659820 (+)
G581562 NA non-coding downstream 47800 18693647 ~ 18693893 (+)
G581584 NA non-coding downstream 62762 18708609 ~ 18708836 (+)
G580997 NA other upstream 152738 18492227 ~ 18492909 (+)
G580365 NA other upstream 828799 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 964979 17670275 ~ 17680668 (+)
G580179 NA other upstream 1245114 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 1311518 17333699 ~ 17336419 (+)
G581976 LOC106581475 other downstream 330831 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1372008 20017855 ~ 20028775 (+)
G583605 NA other downstream 1593064 20238911 ~ 20239797 (+)
G584643 NA other downstream 2434981 21080828 ~ 21082615 (+)
G585573 NA other downstream 3307182 21953029 ~ 21953269 (+)

Expression


Co-expression Network