Gene
RNA
| Item | Value |
|---|---|
| gene id | G581503 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 18649878 ~ 18650294 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: probable G-protein coupled receptor 142 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU663528 | True | 417 | lncRNA | 0.58 | 1 | 18649878 | 18650294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527438 | LOC106575281 | coding | upstream | 68367 | 18523603 ~ 18581511 (+) |
| LOC110527437 | LOC106575282 | coding | upstream | 154189 | 18404754 ~ 18495689 (+) |
| LOC110527431 | LOC106575289 | coding | upstream | 407715 | 18205301 ~ 18242163 (+) |
| LOC110527430 | gemin8 | coding | upstream | 445045 | 18202651 ~ 18204833 (+) |
| LOC110528803 | adcy10 | coding | upstream | 525563 | 18111715 ~ 18127563 (+) |
| LOC110527442 | LOC106575278 | coding | downstream | 533089 | 19183383 ~ 19192955 (+) |
| LOC110527443 | LOC106575277 | coding | downstream | 775071 | 19425365 ~ 19430875 (+) |
| LOC110527444 | LOC106575275 | coding | downstream | 1132551 | 19782845 ~ 19788004 (+) |
| LOC110527447 | LOC106575273 | coding | downstream | 1232274 | 19882568 ~ 19915181 (+) |
| LOC110527448 | LOC106574424 | coding | downstream | 1267151 | 19917445 ~ 19958310 (+) |
| G581498 | NA | non-coding | upstream | 4031 | 18645647 ~ 18645847 (+) |
| G581493 | NA | non-coding | upstream | 7295 | 18642341 ~ 18642583 (+) |
| G581319 | NA | non-coding | upstream | 139644 | 18509918 ~ 18510234 (+) |
| G581037 | NA | non-coding | upstream | 169330 | 18480283 ~ 18480548 (+) |
| G581514 | NA | non-coding | downstream | 8117 | 18658411 ~ 18658738 (+) |
| G581515 | NA | non-coding | downstream | 9289 | 18659583 ~ 18659820 (+) |
| G581562 | NA | non-coding | downstream | 43353 | 18693647 ~ 18693893 (+) |
| G581584 | NA | non-coding | downstream | 58315 | 18708609 ~ 18708836 (+) |
| G581627 | NA | non-coding | downstream | 89136 | 18739430 ~ 18739686 (+) |
| G580997 | NA | other | upstream | 156969 | 18492227 ~ 18492909 (+) |
| G580365 | NA | other | upstream | 833030 | 17813342 ~ 17816848 (+) |
| G580315 | LOC106575303 | other | upstream | 969210 | 17670275 ~ 17680668 (+) |
| G580179 | NA | other | upstream | 1249345 | 17398793 ~ 17400533 (+) |
| si:ch211-181l5.2 | cl10a | other | upstream | 1315749 | 17333699 ~ 17336419 (+) |
| G581976 | LOC106581475 | other | downstream | 326384 | 18976678 ~ 18976999 (+) |
| LOC110528807 | LOC106574429 | other | downstream | 1367561 | 20017855 ~ 20028775 (+) |
| G583605 | NA | other | downstream | 1588617 | 20238911 ~ 20239797 (+) |
| G584643 | NA | other | downstream | 2430534 | 21080828 ~ 21082615 (+) |
| G585573 | NA | other | downstream | 3302735 | 21953029 ~ 21953269 (+) |
