G581764


Basic Information

Item Value
gene id G581764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18836895 ~ 18837110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU663795
ACATGAGAAAGAGGGGAGTACGCCCattccacatcgacagggctgtagtggagcgggtcgagaactTCAACTTCCTTGACGTctacatcactaaggacttaacatggtccacacacaccagctCGTGAAGATGGCAAGACAGCACCTCTTAATTTTacattacatttaaatgtttagCAATCTAGCTATTCTCTTATCAAGAGcgaattacagtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU663795 True 216 lncRNA 0.44 1 18836895 18837110

Neighbor

gene id symbol gene type direction distance location
LOC110527438 LOC106575281 coding upstream 255384 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 341206 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 594732 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 632062 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 712580 18111715 ~ 18127563 (+)
LOC110527442 LOC106575278 coding downstream 346273 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 588255 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 945735 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 1045458 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 1080335 19917445 ~ 19958310 (+)
G581751 NA non-coding upstream 7398 18829270 ~ 18829497 (+)
G581627 NA non-coding upstream 97209 18739430 ~ 18739686 (+)
G581584 NA non-coding upstream 128059 18708609 ~ 18708836 (+)
G581562 NA non-coding upstream 143002 18693647 ~ 18693893 (+)
G581515 NA non-coding upstream 177075 18659583 ~ 18659820 (+)
G581783 NA non-coding downstream 13588 18850698 ~ 18851146 (+)
G581949 NA non-coding downstream 119605 18956715 ~ 18956948 (+)
G581965 NA non-coding downstream 129698 18966808 ~ 18967013 (+)
G581981 NA non-coding downstream 142696 18979806 ~ 18980049 (+)
G581999 NA non-coding downstream 154991 18992101 ~ 18992412 (+)
G580997 NA other upstream 343986 18492227 ~ 18492909 (+)
G580365 NA other upstream 1020047 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1156227 17670275 ~ 17680668 (+)
G580179 NA other upstream 1436362 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 1502766 17333699 ~ 17336419 (+)
G581976 LOC106581475 other downstream 139568 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1180745 20017855 ~ 20028775 (+)
G583605 NA other downstream 1401801 20238911 ~ 20239797 (+)
G584643 NA other downstream 2243718 21080828 ~ 21082615 (+)
G585573 NA other downstream 3115919 21953029 ~ 21953269 (+)

Expression


Co-expression Network