G581981


Basic Information

Item Value
gene id G581981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18979806 ~ 18980049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU664016
gttttaaaagtatgcttagggtcattgtcctgctggaaggtgaacctccatcccagtctcaaatctctggaagactgaaacatgtttccctcaagaatttccctgtttGTAGCTCCAtccattccttaaattctgaccagtttcccagtccctgctgatgaaaaacatcggcagggactggatGTTCGCGTTTTCCTTGGCCAAAAAGCATCATTTTTGTCTCATCttaccttcttcttcttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU664016 True 244 lncRNA 0.44 1 18979806 18980049

Neighbor

gene id symbol gene type direction distance location
LOC110527438 LOC106575281 coding upstream 398295 18523603 ~ 18581511 (+)
LOC110527437 LOC106575282 coding upstream 484117 18404754 ~ 18495689 (+)
LOC110527431 LOC106575289 coding upstream 737643 18205301 ~ 18242163 (+)
LOC110527430 gemin8 coding upstream 774973 18202651 ~ 18204833 (+)
LOC110528803 adcy10 coding upstream 855491 18111715 ~ 18127563 (+)
LOC110527442 LOC106575278 coding downstream 203334 19183383 ~ 19192955 (+)
LOC110527443 LOC106575277 coding downstream 445316 19425365 ~ 19430875 (+)
LOC110527444 LOC106575275 coding downstream 802796 19782845 ~ 19788004 (+)
LOC110527447 LOC106575273 coding downstream 902519 19882568 ~ 19915181 (+)
LOC110527448 LOC106574424 coding downstream 937396 19917445 ~ 19958310 (+)
G581965 NA non-coding upstream 12793 18966808 ~ 18967013 (+)
G581949 NA non-coding upstream 22858 18956715 ~ 18956948 (+)
G581783 NA non-coding upstream 128660 18850698 ~ 18851146 (+)
G581764 NA non-coding upstream 142696 18836895 ~ 18837110 (+)
G581751 NA non-coding upstream 150309 18829270 ~ 18829497 (+)
G581999 NA non-coding downstream 12052 18992101 ~ 18992412 (+)
G582010 NA non-coding downstream 20918 19000967 ~ 19001168 (+)
G582011 NA non-coding downstream 21845 19001894 ~ 19002405 (+)
G582021 NA non-coding downstream 27846 19007895 ~ 19008122 (+)
G582025 NA non-coding downstream 30335 19010384 ~ 19010616 (+)
G581976 LOC106581475 other upstream 2807 18976678 ~ 18976999 (+)
G580997 NA other upstream 486897 18492227 ~ 18492909 (+)
G580365 NA other upstream 1162958 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 1299138 17670275 ~ 17680668 (+)
G580179 NA other upstream 1579273 17398793 ~ 17400533 (+)
LOC110528807 LOC106574429 other downstream 1037806 20017855 ~ 20028775 (+)
G583605 NA other downstream 1258862 20238911 ~ 20239797 (+)
G584643 NA other downstream 2100779 21080828 ~ 21082615 (+)
G585573 NA other downstream 2972980 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 3376534 22356500 ~ 22360232 (+)

Expression


Co-expression Network